Protein : Qrob_P0004580.2 Q. robur
Protein Identifier  ? Qrob_P0004580.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0356//KOG0361//KOG0362//KOG0363 - Mitochondrial chaperonin Cpn60/Hsp60p [Posttranslational modification protein turnover chaperones]. // Chaperonin complex component TCP-1 eta subunit (CCT7) [Posttranslational modification protein turnover chaperones]. // Chaperonin complex component TCP-1 theta subunit (CCT8) [Posttranslational modification protein turnover chaperones]. // Chaperonin complex component TCP-1 beta subunit (CCT2) [Posttranslational modification protein turnover chaperones]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 587  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0042026 protein refolding The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0009s01470g 1 586 + 586 Gaps:2 100.00 586 91.81 0.0 POPTRDRAFT_833331 RUBISCO SUBUNIT BINDING-protein ALPHA SUBUNIT
blastp_kegg lcl|pop:POPTR_0004s22340g 1 583 + 583 Gaps:2 99.32 587 91.60 0.0 RUBISCO SUBUNIT BINDING-protein ALPHA SUBUNIT
blastp_kegg lcl|pxb:103964812 1 586 + 586 Gaps:1 100.00 585 89.74 0.0 ruBisCO large subunit-binding protein subunit alpha-like
blastp_kegg lcl|pxb:103956732 1 586 + 586 Gaps:1 100.00 585 89.74 0.0 ruBisCO large subunit-binding protein subunit alpha-like
blastp_kegg lcl|mdm:103447911 1 586 + 586 Gaps:1 100.00 585 91.28 0.0 ruBisCO large subunit-binding protein subunit alpha
blastp_kegg lcl|pmum:103325743 1 586 + 586 Gaps:1 100.00 585 91.11 0.0 ruBisCO large subunit-binding protein subunit alpha
blastp_kegg lcl|pxb:103947687 1 586 + 586 Gaps:1 100.00 585 90.77 0.0 ruBisCO large subunit-binding protein subunit alpha
blastp_kegg lcl|vvi:100253324 1 586 + 586 Gaps:2 100.00 586 89.76 0.0 ruBisCO large subunit-binding protein subunit alpha chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa003328mg 1 586 + 586 Gaps:1 100.00 585 90.77 0.0 hypothetical protein
blastp_kegg lcl|cam:101503231 1 586 + 586 Gaps:2 100.00 588 88.95 0.0 ruBisCO large subunit-binding protein subunit alpha chloroplastic-like
blastp_pdb 1wf4_n 48 579 + 532 Gaps:7 98.53 543 54.21 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_m 48 579 + 532 Gaps:7 98.53 543 54.21 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_l 48 579 + 532 Gaps:7 98.53 543 54.21 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_k 48 579 + 532 Gaps:7 98.53 543 54.21 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_j 48 579 + 532 Gaps:7 98.53 543 54.21 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_i 48 579 + 532 Gaps:7 98.53 543 54.21 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_h 48 579 + 532 Gaps:7 98.53 543 54.21 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_g 48 579 + 532 Gaps:7 98.53 543 54.21 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_f 48 579 + 532 Gaps:7 98.53 543 54.21 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_pdb 1wf4_e 48 579 + 532 Gaps:7 98.53 543 54.21 0.0 mol:protein length:543 Cpn60(GroEL)
blastp_uniprot_sprot sp|P08926|RUBA_PEA 1 586 + 586 Gaps:1 100.00 587 88.07 0.0 RuBisCO large subunit-binding protein subunit alpha chloroplastic OS Pisum sativum PE 1 SV 2
blastp_uniprot_sprot sp|P21239|RUB1_BRANA 41 586 + 546 none 100.00 546 88.64 0.0 RuBisCO large subunit-binding protein subunit alpha chloroplastic (Fragment) OS Brassica napus PE 2 SV 2
blastp_uniprot_sprot sp|P21238|CPNA1_ARATH 12 586 + 575 Gaps:2 98.12 586 85.57 0.0 Chaperonin 60 subunit alpha 1 chloroplastic OS Arabidopsis thaliana GN CPN60A1 PE 1 SV 2
blastp_uniprot_sprot sp|P34794|RUB2_BRANA 1 586 + 586 Gaps:3 100.00 583 83.70 0.0 RuBisCO large subunit-binding protein subunit alpha chloroplastic OS Brassica napus PE 2 SV 1
blastp_uniprot_sprot sp|P08824|RUBA_RICCO 58 552 + 495 none 100.00 495 92.93 0.0 RuBisCO large subunit-binding protein subunit alpha (Fragment) OS Ricinus communis PE 2 SV 1
blastp_uniprot_sprot sp|P08823|RUBA_WHEAT 46 583 + 538 none 99.08 543 83.64 0.0 RuBisCO large subunit-binding protein subunit alpha chloroplastic (Fragment) OS Triticum aestivum PE 1 SV 1
blastp_uniprot_sprot sp|Q42694|RUBA_CHLRE 37 586 + 550 Gaps:7 96.03 580 70.20 0.0 RuBisCO large subunit-binding protein subunit alpha chloroplastic OS Chlamydomonas reinhardtii PE 1 SV 1
blastp_uniprot_sprot sp|B0CFQ6|CH601_ACAM1 48 573 + 526 Gaps:3 94.09 558 61.71 0.0 60 kDa chaperonin 1 OS Acaryochloris marina (strain MBIC 11017) GN groL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q56XV8|CPNA2_ARATH 36 576 + 541 Gaps:5 94.96 575 62.09 0.0 Chaperonin 60 subunit alpha 2 chloroplastic OS Arabidopsis thaliana GN CPN60A2 PE 2 SV 1
blastp_uniprot_sprot sp|Q2JKV7|CH602_SYNJB 48 584 + 537 Gaps:2 99.63 539 58.47 0.0 60 kDa chaperonin 2 OS Synechococcus sp. (strain JA-2-3B'a(2-13)) GN groL2 PE 3 SV 1

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 411 563 153 G3DSA:1.10.560.10 none none IPR027413
Pfam 68 571 504 PF00118 none TCP-1/cpn60 chaperonin family IPR002423
Coils 376 404 29 Coil none none none
SUPERFAMILY 228 420 193 SSF52029 none none IPR027409
SUPERFAMILY 407 452 46 SSF54849 none none none
PANTHER 36 583 548 PTHR11353:SF11 none none none
SUPERFAMILY 181 247 67 SSF54849 none none none
PRINTS 394 419 26 PR00298 none 60kDa chaperonin signature IPR001844
PRINTS 312 335 24 PR00298 none 60kDa chaperonin signature IPR001844
PRINTS 442 463 22 PR00298 none 60kDa chaperonin signature IPR001844
PRINTS 72 98 27 PR00298 none 60kDa chaperonin signature IPR001844
PRINTS 127 154 28 PR00298 none 60kDa chaperonin signature IPR001844
TIGRFAM 48 572 525 TIGR02348 none GroEL: chaperonin GroL IPR001844
ProSitePatterns 449 460 12 PS00296 none Chaperonins cpn60 signature. IPR018370
PANTHER 36 583 548 PTHR11353 none none IPR002423
Gene3D 233 410 178 G3DSA:3.50.7.10 none none IPR027409
Gene3D 38 232 195 G3DSA:1.10.560.10 none none IPR027413
SUPERFAMILY 58 182 125 SSF48592 none none none
SUPERFAMILY 453 567 115 SSF48592 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 59   Mitochondrion 4 0.019 0.790 NON-PLANT 59