Protein : Qrob_P0004340.2 Q. robur
Protein Identifier  ? Qrob_P0004340.2 Organism . Name  Quercus robur
Score  74.0 Score Type  egn
Protein Description  (M=3) K02737 - 20S proteasome subunit beta 5 [EC:3.4.25.1] Code Enzyme  EC:3.4.25.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 242  
Kegg Orthology  K02737
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0004298 threonine-type endopeptidase activity Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO:0005839 proteasome core complex A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
GO:0051603 proteolysis involved in cellular protein catabolic process The hydrolysis of a peptide bond or bonds within a protein as part of the chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
GO:0016866 intramolecular transferase activity Catalysis of the transfer of a functional group from one position to another within a single molecule.
GO:0030244 cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|aly:ARALYDRAFT_888660 149 235 + 87 none 65.91 132 86.21 2e-44 hypothetical protein
blastp_kegg lcl|pxb:103965252 75 225 + 151 Gaps:14 57.41 270 58.06 1e-43 proteasome subunit beta type-5-like
blastp_kegg lcl|mdm:103444668 75 225 + 151 Gaps:14 57.41 270 58.06 1e-43 proteasome subunit beta type-5-like
blastp_kegg lcl|pper:PRUPE_ppa009896mg 94 225 + 132 Gaps:8 47.79 272 65.38 2e-43 hypothetical protein
blastp_kegg lcl|mdm:103403145 94 225 + 132 Gaps:8 47.79 272 65.38 2e-43 proteasome subunit beta type-5
blastp_kegg lcl|pop:POPTR_0008s17700g 116 225 + 110 Gaps:12 36.03 272 82.65 2e-43 POPTRDRAFT_419163 20S proteasome beta subunit family protein
blastp_kegg lcl|pxb:103961487 94 225 + 132 Gaps:8 47.79 272 65.38 2e-43 proteasome subunit beta type-5
blastp_kegg lcl|cit:102624332 116 228 + 113 Gaps:12 33.44 302 80.20 4e-43 proteasome subunit beta type-5-B-like
blastp_kegg lcl|fve:101303771 93 225 + 133 Gaps:6 46.57 277 65.89 5e-43 proteasome subunit beta type-5-like
blastp_kegg lcl|pop:POPTR_0010s06820g 116 225 + 110 Gaps:12 35.77 274 81.63 6e-43 POPTRDRAFT_1089650 20S proteasome beta subunit family protein
blastp_pdb 3une_1 149 225 + 77 none 37.56 205 68.83 4e-30 mol:protein length:205 Proteasome subunit beta type-5
blastp_pdb 3une_m 149 225 + 77 none 37.56 205 68.83 4e-30 mol:protein length:205 Proteasome subunit beta type-5
blastp_pdb 3une_Y 149 225 + 77 none 37.56 205 68.83 4e-30 mol:protein length:205 Proteasome subunit beta type-5
blastp_pdb 3une_K 149 225 + 77 none 37.56 205 68.83 4e-30 mol:protein length:205 Proteasome subunit beta type-5
blastp_pdb 3unb_1 149 225 + 77 none 37.56 205 68.83 4e-30 mol:protein length:205 Proteasome subunit beta type-8
blastp_pdb 3unb_m 149 225 + 77 none 37.56 205 68.83 4e-30 mol:protein length:205 Proteasome subunit beta type-8
blastp_pdb 3unb_Y 149 225 + 77 none 37.56 205 68.83 4e-30 mol:protein length:205 Proteasome subunit beta type-8
blastp_pdb 3unb_K 149 225 + 77 none 37.56 205 68.83 4e-30 mol:protein length:205 Proteasome subunit beta type-8
blastp_pdb 1iru_Z 149 225 + 77 none 37.75 204 68.83 5e-30 mol:protein length:204 20S proteasome
blastp_pdb 1iru_L 149 225 + 77 none 37.75 204 68.83 5e-30 mol:protein length:204 20S proteasome
blastp_uniprot_sprot sp|Q9LIP2|PSB5B_ARATH 116 225 + 110 Gaps:12 35.90 273 79.59 2e-43 Proteasome subunit beta type-5-B OS Arabidopsis thaliana GN PBE2 PE 1 SV 1
blastp_uniprot_sprot sp|O24361|PSB5_SPIOL 116 225 + 110 Gaps:12 36.03 272 80.61 3e-43 Proteasome subunit beta type-5 OS Spinacia oleracea PE 2 SV 1
blastp_uniprot_sprot sp|O23717|PSB5A_ARATH 116 226 + 111 Gaps:12 36.13 274 78.79 3e-43 Proteasome subunit beta type-5-A OS Arabidopsis thaliana GN PBE1 PE 1 SV 1
blastp_uniprot_sprot sp|O04300|UPTG_PEA 91 151 + 61 none 16.76 364 93.44 3e-31 Alpha-1 4-glucan-protein synthase [UDP-forming] OS Pisum sativum GN UPTG PE 1 SV 1
blastp_uniprot_sprot sp|Q9SC19|UPTG1_SOLTU 91 151 + 61 none 16.71 365 91.80 7e-31 Alpha-1 4-glucan-protein synthase [UDP-forming] 1 OS Solanum tuberosum GN UPTG1 PE 1 SV 2
blastp_uniprot_sprot sp|P80607|UPTG_MAIZE 91 151 + 61 none 16.76 364 91.80 1e-30 Alpha-1 4-glucan-protein synthase [UDP-forming] OS Zea mays GN UPTG PE 1 SV 2
blastp_uniprot_sprot sp|Q8RU27|UPTG2_SOLTU 91 151 + 61 none 16.67 366 90.16 2e-30 Alpha-1 4-glucan-protein synthase [UDP-forming] 2 OS Solanum tuberosum GN UPTG2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8H8T0|RGP1_ORYSJ 91 151 + 61 none 16.76 364 86.89 1e-29 UDP-arabinopyranose mutase 1 OS Oryza sativa subsp. japonica GN UAM1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6Z4G3|RGP3_ORYSJ 91 151 + 61 none 16.67 366 86.89 2e-29 UDP-arabinopyranose mutase 3 OS Oryza sativa subsp. japonica GN UAM3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SRT9|RGP1_ARATH 91 151 + 61 none 17.09 357 88.52 2e-29 UDP-arabinopyranose mutase 1 OS Arabidopsis thaliana GN RGP1 PE 1 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 149 225 77 PTHR11599:SF3 none none none
SUPERFAMILY 148 225 78 SSF56235 none none IPR029055
Phobius 33 55 23 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 149 226 78 G3DSA:3.60.20.10 none none IPR029055
Phobius 1 32 32 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 25 32 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 14 24 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 56 75 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 13 13 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 76 241 166 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 149 226 78 PF00227 "Reactome:REACT_11045","Reactome:REACT_13","Reactome:REACT_13635","Reactome:REACT_152","Reactome:REACT_1538","Reactome:REACT_383","Reactome:REACT_578","Reactome:REACT_6185","Reactome:REACT_6850" Proteasome subunit IPR001353
Pfam 91 151 61 PF03214 none Reversibly glycosylated polypeptide IPR004901
PANTHER 149 225 77 PTHR11599 none none none

1 Localization

Analysis Start End Length
TMHMM 56 75 19

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 29   Secretory pathway 4 0.523 0.288 NON-PLANT 29