Protein : Qrob_P0003680.2 Q. robur
Protein Identifier  ? Qrob_P0003680.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0192//KOG0194//KOG0197//KOG0198//KOG0581//KOG0591//KOG0595//KOG0598//KOG1187//KOG3653 - Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]. // Protein tyrosine kinase [Signal transduction mechanisms]. // Tyrosine kinases [Signal transduction mechanisms]. // MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]. // Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]. // NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control cell division chromosome partitioning]. // Serine/threonine-protein kinase involved in autophagy [Posttranslational modification protein turnover chaperones Intracellular trafficking secretion and vesicular transport Signal transduction mechanisms]. // Ribosomal protein S6 kinase and related proteins [General function prediction only Signal transduction mechanisms]. // Serine/threonine protein kinase [Signal transduction mechanisms]. // Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]. Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1125  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0004672 protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO:0006468 protein phosphorylation The process of introducing a phosphate group on to a protein.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101310989 8 1123 + 1116 Gaps:40 99.38 1131 65.04 0.0 LRR receptor-like serine/threonine-protein kinase RPK2-like
blastp_kegg lcl|pmum:103342054 8 1123 + 1116 Gaps:41 97.41 1159 66.87 0.0 LRR receptor-like serine/threonine-protein kinase RPK2
blastp_kegg lcl|pxb:103947259 15 1123 + 1109 Gaps:38 97.81 1144 66.31 0.0 LRR receptor-like serine/threonine-protein kinase RPK2
blastp_kegg lcl|mdm:103430662 15 1123 + 1109 Gaps:38 97.81 1144 66.58 0.0 LRR receptor-like serine/threonine-protein kinase RPK2
blastp_kegg lcl|cit:102613478 12 1122 + 1111 Gaps:40 99.02 1124 66.76 0.0 LRR receptor-like serine/threonine-protein kinase RPK2-like
blastp_kegg lcl|cic:CICLE_v10033427mg 26 1122 + 1097 Gaps:41 89.34 1220 67.34 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0008s09590g 26 1122 + 1097 Gaps:38 97.77 1120 66.67 0.0 POPTRDRAFT_564304 RECEPTOR-LIKE protein KINASE 1
blastp_kegg lcl|tcc:TCM_011525 7 1123 + 1117 Gaps:84 99.17 1090 67.99 0.0 Receptor-like protein kinase 2 putative
blastp_kegg lcl|vvi:100254985 37 1124 + 1088 Gaps:33 96.49 1139 64.70 0.0 LRR receptor-like serine/threonine-protein kinase RPK2-like
blastp_kegg lcl|rcu:RCOM_1025310 7 1124 + 1118 Gaps:56 99.04 1141 63.72 0.0 hypothetical protein
blastp_pdb 3tl8_H 837 1117 + 281 Gaps:7 80.23 349 39.29 4e-57 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 3tl8_G 837 1117 + 281 Gaps:7 80.23 349 39.29 4e-57 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 3tl8_D 837 1117 + 281 Gaps:7 80.23 349 39.29 4e-57 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 3tl8_A 837 1117 + 281 Gaps:7 80.23 349 39.29 4e-57 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 2qkw_B 822 1122 + 301 Gaps:19 92.21 321 38.18 7e-43 mol:protein length:321 Protein kinase
blastp_pdb 3hgk_D 822 1122 + 301 Gaps:19 90.52 327 38.18 8e-43 mol:protein length:327 Protein kinase
blastp_pdb 3hgk_C 822 1122 + 301 Gaps:19 90.52 327 38.18 8e-43 mol:protein length:327 Protein kinase
blastp_pdb 3hgk_B 822 1122 + 301 Gaps:19 90.52 327 38.18 8e-43 mol:protein length:327 Protein kinase
blastp_pdb 3hgk_A 822 1122 + 301 Gaps:19 90.52 327 38.18 8e-43 mol:protein length:327 Protein kinase
blastp_pdb 3rj0_A 37 739 + 703 Gaps:384 91.58 772 54.03 1e-37 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_uniprot_sprot sp|Q9S7I6|RPK2_ARATH 17 1124 + 1108 Gaps:66 97.83 1151 58.70 0.0 LRR receptor-like serine/threonine-protein kinase RPK2 OS Arabidopsis thaliana GN RPK2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZRF9|RPK1_ARATH 12 1122 + 1111 Gaps:47 98.70 540 63.98 1e-170 Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS Arabidopsis thaliana GN RPK1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SHI2|Y1723_ARATH 14 1118 + 1105 Gaps:115 97.00 1101 35.49 5e-141 Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS Arabidopsis thaliana GN At1g17230 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LVP0|Y5639_ARATH 33 1113 + 1081 Gaps:145 94.92 1102 35.37 8e-138 Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS Arabidopsis thaliana GN At5g63930 PE 1 SV 1
blastp_uniprot_sprot sp|O49318|Y2317_ARATH 10 1113 + 1104 Gaps:124 95.91 1124 33.77 2e-130 Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS Arabidopsis thaliana GN At2g33170 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LYN8|EXS_ARATH 32 1119 + 1088 Gaps:170 97.99 1192 32.53 8e-130 Leucine-rich repeat receptor protein kinase EXS OS Arabidopsis thaliana GN EXS PE 1 SV 1
blastp_uniprot_sprot sp|Q9SSL9|PEPR1_ARATH 47 1120 + 1074 Gaps:161 94.84 1123 32.77 3e-121 Leucine-rich repeat receptor-like protein kinase PEPR1 OS Arabidopsis thaliana GN PEPR1 PE 1 SV 1
blastp_uniprot_sprot sp|P93194|RPK1_IPONI 14 1118 + 1105 Gaps:160 98.02 1109 33.67 1e-120 Receptor-like protein kinase OS Ipomoea nil GN INRPK1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FZ59|PEPR2_ARATH 10 1120 + 1111 Gaps:139 98.53 1088 33.58 1e-120 Leucine-rich repeat receptor-like protein kinase PEPR2 OS Arabidopsis thaliana GN PEPR2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SYQ8|CLV1_ARATH 30 1116 + 1087 Gaps:201 96.33 980 34.96 4e-120 Receptor protein kinase CLAVATA1 OS Arabidopsis thaliana GN CLV1 PE 1 SV 3

48 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 261 283 23 PF00560 none Leucine Rich Repeat IPR001611
Pfam 310 331 22 PF00560 none Leucine Rich Repeat IPR001611
Phobius 22 28 7 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 403 442 40 SSF52047 none none none
SUPERFAMILY 129 332 204 SSF52047 none none none
SUPERFAMILY 603 726 124 SSF52047 none none none
Phobius 780 802 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SMART 661 685 25 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 637 660 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 307 331 25 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 232 255 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 184 208 25 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 160 183 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 379 389 11 PTHR24420:SF237 none none none
SUPERFAMILY 828 1116 289 SSF56112 none none IPR011009
Pfam 615 674 60 PF13855 none Leucine rich repeat IPR001611
Pfam 162 221 60 PF13855 none Leucine rich repeat IPR001611
PRINTS 428 441 14 PR00019 none Leucine-rich repeat signature none
PRINTS 661 674 14 PR00019 none Leucine-rich repeat signature none
ProSitePatterns 965 977 13 PS00108 none Serine/Threonine protein kinases active-site signature. IPR008271
SMART 841 1117 277 SM00220 none Serine/Threonine protein kinases, catalytic domain IPR002290
PANTHER 576 1122 547 PTHR24420:SF237 none none none
PANTHER 1 85 85 PTHR24420:SF237 none none none
PANTHER 266 325 60 PTHR24420:SF237 none none none
PANTHER 149 238 90 PTHR24420:SF237 none none none
Pfam 32 71 40 PF08263 none Leucine rich repeat N-terminal domain IPR013210
Pfam 685 708 24 PF13516 none Leucine Rich repeat none
Pfam 425 441 17 PF13516 none Leucine Rich repeat none

4 Localization

Analysis Start End Length
SignalP_EUK 1 28 27
TMHMM 12 31 19
TMHMM 780 802 22
SignalP_GRAM_POSITIVE 1 30 29

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Secretory pathway 1 0.966 0.013 NON-PLANT 28