Protein : Qrob_P0003590.2 Q. robur
Protein Identifier  ? Qrob_P0003590.2 Organism . Name  Quercus robur
Score  44.3 Score Type  egn
Protein Description  (M=18) PF03107 - C1 domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 962  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0047134 protein-disulfide reductase activity Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+.
GO:0035556 intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103339502 1 961 + 961 Gaps:450 99.65 1137 36.01 1e-90 uncharacterized LOC103339502
blastp_kegg lcl|tcc:TCM_042866 1 961 + 961 Gaps:332 89.96 737 45.10 4e-90 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|tcc:TCM_025068 1 961 + 961 Gaps:298 90.90 670 54.19 3e-85 Cysteine/Histidine-rich C1 domain family protein putative isoform 1
blastp_kegg lcl|pop:POPTR_0016s05820g 1 961 + 961 Gaps:447 98.96 675 56.29 1e-84 POPTRDRAFT_576373 DC1 domain-containing family protein
blastp_kegg lcl|fve:101301568 2 961 + 960 Gaps:481 97.87 1174 37.68 5e-84 uncharacterized protein LOC101301568
blastp_kegg lcl|tcc:TCM_024834 1 961 + 961 Gaps:844 97.91 1246 50.33 8e-84 hypothetical protein
blastp_kegg lcl|tcc:TCM_025071 1 961 + 961 Gaps:376 98.52 674 54.52 1e-82 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pop:POPTR_0016s04640g 1 961 + 961 Gaps:571 98.43 701 56.38 7e-82 POPTRDRAFT_576246 hypothetical protein
blastp_kegg lcl|tcc:TCM_025246 1 961 + 961 Gaps:359 90.65 674 56.46 2e-80 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pper:PRUPE_ppa019516mg 2 961 + 960 Gaps:273 99.29 560 45.50 1e-76 hypothetical protein

37 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 101 183 83 SSF57889 none none none
SUPERFAMILY 775 857 83 SSF57889 none none none
PANTHER 432 483 52 PTHR32410 none none none
PANTHER 289 405 117 PTHR32410 none none none
PANTHER 508 961 454 PTHR32410 none none none
SUPERFAMILY 878 955 78 SSF57889 none none none
SMART 855 902 48 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 591 636 46 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 129 175 47 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 344 393 50 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 533 585 53 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 289 336 48 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 71 123 53 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 800 854 55 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 750 797 48 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
Pfam 662 689 28 PF03107 none C1 domain IPR004146
Gene3D 763 793 31 G3DSA:3.30.60.20 none none none
Gene3D 302 332 31 G3DSA:3.30.60.20 none none none
SMART 765 822 58 SM00249 none PHD zinc finger IPR001965
SMART 553 623 71 SM00249 none PHD zinc finger IPR001965
SMART 408 468 61 SM00249 none PHD zinc finger IPR001965
SMART 304 361 58 SM00249 none PHD zinc finger IPR001965
SMART 91 162 72 SM00249 none PHD zinc finger IPR001965
Pfam 553 579 27 PF07649 none C1-like domain IPR011424
Pfam 304 330 27 PF07649 none C1-like domain IPR011424
Pfam 143 170 28 PF07649 none C1-like domain IPR011424
Pfam 765 792 28 PF07649 none C1-like domain IPR011424
Pfam 91 117 27 PF07649 none C1-like domain IPR011424
Pfam 604 631 28 PF07649 none C1-like domain IPR011424
ProSiteProfiles 856 913 58 PS50081 none Zinc finger phorbol-ester/DAG-type profile. IPR002219

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting