Protein : Qrob_P0003540.2 Q. robur
Protein Identifier  ? Qrob_P0003540.2 Organism . Name  Quercus robur
Score  13.6 Score Type  egn
Protein Description  (M=53) PF07649 - C1-like domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 530  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0047134 protein-disulfide reductase activity Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+.
GO:0035556 intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0016s05820g 12 529 + 518 Gaps:251 98.67 675 51.20 2e-90 POPTRDRAFT_576373 DC1 domain-containing family protein
blastp_kegg lcl|tcc:TCM_025246 35 529 + 495 Gaps:49 91.10 674 38.76 2e-84 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|tcc:TCM_025068 14 529 + 516 Gaps:182 90.90 670 45.81 2e-84 Cysteine/Histidine-rich C1 domain family protein putative isoform 1
blastp_kegg lcl|tcc:TCM_026405 39 529 + 491 Gaps:205 85.49 703 46.76 4e-83 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|tcc:TCM_025071 14 529 + 516 Gaps:209 90.95 674 46.66 6e-83 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pop:POPTR_0016s04780g 36 529 + 494 Gaps:234 93.73 622 51.29 5e-82 hypothetical protein
blastp_kegg lcl|pop:POPTR_0016s04640g 35 529 + 495 Gaps:223 91.01 701 45.14 6e-82 POPTRDRAFT_576246 hypothetical protein
blastp_kegg lcl|tcc:TCM_042866 32 529 + 498 Gaps:285 91.45 737 49.26 1e-79 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pper:PRUPE_ppa019516mg 58 529 + 472 Gaps:48 88.21 560 36.03 8e-79 hypothetical protein
blastp_kegg lcl|tcc:TCM_020092 20 524 + 505 Gaps:217 90.01 671 48.34 3e-78 Cysteine/Histidine-rich C1 domain family protein putative

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 446 523 78 SSF57889 none none none
SUPERFAMILY 183 261 79 SSF57889 none none none
Gene3D 114 151 38 G3DSA:3.30.60.20 none none none
SUPERFAMILY 69 160 92 SSF57889 none none none
ProSiteProfiles 107 154 48 PS50081 none Zinc finger phorbol-ester/DAG-type profile. IPR002219
SMART 158 204 47 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 103 152 50 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 423 470 48 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 318 365 48 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SUPERFAMILY 25 82 58 SSF57889 none none none
SUPERFAMILY 343 425 83 SSF57889 none none none
Pfam 120 146 27 PF07649 none C1-like domain IPR011424
Pfam 333 359 27 PF07649 none C1-like domain IPR011424
Pfam 172 199 28 PF07649 none C1-like domain IPR011424
Gene3D 329 361 33 G3DSA:3.30.60.20 none none none
PANTHER 313 529 217 PTHR32410 none none none
PANTHER 45 290 246 PTHR32410 none none none

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 34   Secretory pathway 4 0.579 0.126 NON-PLANT 34