Protein : Qrob_P0003420.2 Q. robur
Protein Identifier  ? Qrob_P0003420.2 Organism . Name  Quercus robur
Score  40.0 Score Type  egn
Protein Description  (M=4) PTHR21493//PTHR21493:SF92 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED Code Enzyme  EC:3.1.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 463  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006629 lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10011372mg 19 461 + 443 Gaps:127 97.21 574 42.29 5e-121 hypothetical protein
blastp_kegg lcl|cit:102630862 19 461 + 443 Gaps:126 97.21 573 41.65 6e-120 senescence-associated carboxylesterase 101-like
blastp_kegg lcl|fve:101293969 17 461 + 445 Gaps:115 96.49 570 39.45 2e-107 uncharacterized protein LOC101293969
blastp_kegg lcl|pper:PRUPE_ppa003247mg 17 449 + 433 Gaps:130 94.57 589 38.60 9e-107 hypothetical protein
blastp_kegg lcl|cam:101495388 19 461 + 443 Gaps:121 95.71 583 39.96 1e-104 uncharacterized LOC101495388
blastp_kegg lcl|cmo:103487057 18 460 + 443 Gaps:127 95.73 585 38.04 4e-104 senescence-associated carboxylesterase 101
blastp_kegg lcl|fve:101294453 18 461 + 444 Gaps:115 96.15 571 38.62 1e-103 uncharacterized protein LOC101294453
blastp_kegg lcl|tcc:TCM_016815 19 461 + 443 Gaps:129 95.95 592 38.03 1e-103 Senescence-associated gene 101 putative isoform 1
blastp_kegg lcl|pmum:103329912 17 452 + 436 Gaps:139 91.92 619 36.91 9e-103 senescence-associated carboxylesterase 101-like
blastp_kegg lcl|gmx:100809557 94 461 + 368 Gaps:71 75.43 582 45.10 3e-102 senescence-associated carboxylesterase 101-like
blastp_uniprot_sprot sp|Q4F883|SG101_ARATH 22 461 + 440 Gaps:90 96.09 537 35.85 3e-75 Senescence-associated carboxylesterase 101 OS Arabidopsis thaliana GN SAG101 PE 1 SV 1
rpsblast_cdd gnl|CDD|73213 97 189 + 93 Gaps:6 37.99 229 29.89 2e-10 cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides glycerol and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation " the process of becoming active at the lipid/water interface although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu but unlike most serine proteases the active site is buried inside the structure. A "lid" or "flap" covers the active site making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation allowing the lipid substrate access to the active site. .
rpsblast_cdd gnl|CDD|201961 100 173 + 74 Gaps:4 51.06 141 34.72 3e-10 pfam01764 Lipase_3 Lipase (class 3).
rpsblast_cdd gnl|CDD|29806 100 177 + 78 Gaps:8 48.37 153 31.08 3e-07 cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides glycerol and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation" the process of becoming active at the lipid/water interface although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu but unlike most serine proteases the active site is buried inside the structure. A "lid" or "flap" covers the active site making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation allowing the lipid substrate access to the active site..
rpsblast_kog gnl|CDD|39769 36 173 + 138 Gaps:18 37.50 336 29.37 3e-07 KOG4569 KOG4569 KOG4569 Predicted lipase [Lipid transport and metabolism].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 95 183 89 PTHR21493 none none none
SUPERFAMILY 97 189 93 SSF53474 none none IPR029058
Pfam 100 174 75 PF01764 "Reactome:REACT_14797","Reactome:REACT_604" Lipase (class 3) IPR002921
PANTHER 95 183 89 PTHR21493:SF92 none none none
Gene3D 97 177 81 G3DSA:3.40.50.1820 none none IPR029058

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting