Protein : Qrob_P0002950.2 Q. robur
Protein Identifier  ? Qrob_P0002950.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K00688 - starch phosphorylase [EC:2.4.1.1] Code Enzyme  EC:2.4.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 974  
Kegg Orthology  K00688
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0008184 glycogen phosphorylase activity Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa000958mg 1 973 + 973 Gaps:25 100.00 950 84.95 0.0 hypothetical protein
blastp_kegg lcl|pmum:103321498 1 973 + 973 Gaps:25 100.00 950 84.95 0.0 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|pop:POPTR_0010s16770g 1 973 + 973 Gaps:34 100.00 953 83.53 0.0 POPTRDRAFT_881100 hypothetical protein
blastp_kegg lcl|fve:101292016 1 973 + 973 Gaps:20 100.00 963 82.45 0.0 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|mdm:103431906 1 972 + 972 Gaps:27 99.89 952 82.54 0.0 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|mdm:103425564 1 972 + 972 Gaps:27 99.89 952 82.54 0.0 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|vvi:100257811 1 973 + 973 Gaps:32 96.94 1012 80.73 0.0 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|rcu:RCOM_1621440 1 973 + 973 Gaps:46 100.00 973 79.96 0.0 glycogen phosphorylase putative (EC:2.4.1.1)
blastp_kegg lcl|gmx:100818065 1 972 + 972 Gaps:47 99.90 978 77.48 0.0 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|cmo:103489175 32 972 + 941 Gaps:15 96.27 964 80.06 0.0 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_pdb 1ygp_B 96 970 + 875 Gaps:115 94.20 879 48.19 0.0 mol:protein length:879 YEAST GLYCOGEN PHOSPHORYLASE
blastp_pdb 1ygp_A 96 970 + 875 Gaps:115 94.20 879 48.19 0.0 mol:protein length:879 YEAST GLYCOGEN PHOSPHORYLASE
blastp_pdb 1z8d_A 114 969 + 856 Gaps:100 92.40 842 44.34 0.0 mol:protein length:842 Glycogen phosphorylase muscle form
blastp_pdb 2gj4_A 114 969 + 856 Gaps:100 94.42 824 44.09 0.0 mol:protein length:824 Glycogen phosphorylase muscle form
blastp_pdb 3t3i_A 114 969 + 856 Gaps:100 92.40 842 44.09 0.0 mol:protein length:842 Glycogen phosphorylase muscle form
blastp_pdb 3t3h_A 114 969 + 856 Gaps:100 92.40 842 44.09 0.0 mol:protein length:842 Glycogen phosphorylase muscle form
blastp_pdb 3t3g_A 114 969 + 856 Gaps:100 92.40 842 44.09 0.0 mol:protein length:842 Glycogen phosphorylase muscle form
blastp_pdb 3t3e_A 114 969 + 856 Gaps:100 92.40 842 44.09 0.0 mol:protein length:842 Glycogen phosphorylase muscle form
blastp_pdb 3t3d_A 114 969 + 856 Gaps:100 92.40 842 44.09 0.0 mol:protein length:842 Glycogen phosphorylase muscle form
blastp_pdb 3syr_A 114 969 + 856 Gaps:100 92.40 842 44.09 0.0 mol:protein length:842 Glycogen phosphorylase muscle form
blastp_uniprot_sprot sp|P53535|PHSL2_SOLTU 58 973 + 916 Gaps:35 94.56 974 79.91 0.0 Alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic OS Solanum tuberosum GN STP-1 PE 1 SV 1
blastp_uniprot_sprot sp|P04045|PHSL1_SOLTU 8 970 + 963 Gaps:35 99.59 966 74.32 0.0 Alpha-1 4 glucan phosphorylase L-1 isozyme chloroplastic/amyloplastic OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|P53536|PHSL_VICFA 9 972 + 964 Gaps:57 98.80 1003 72.86 0.0 Alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic OS Vicia faba GN PHO1 PE 1 SV 2
blastp_uniprot_sprot sp|P27598|PHSL_IPOBA 41 973 + 933 Gaps:29 96.96 955 76.57 0.0 Alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic OS Ipomoea batatas PE 2 SV 1
blastp_uniprot_sprot sp|Q9LIB2|PHS1_ARATH 41 973 + 933 Gaps:45 95.43 962 75.05 0.0 Alpha-glucan phosphorylase 1 OS Arabidopsis thaliana GN PHS1 PE 1 SV 1
blastp_uniprot_sprot sp|P53537|PHSH_VICFA 84 973 + 890 Gaps:77 96.56 842 65.31 0.0 Alpha-glucan phosphorylase H isozyme OS Vicia faba PE 1 SV 1
blastp_uniprot_sprot sp|Q9SD76|PHS2_ARATH 85 973 + 889 Gaps:77 97.03 841 64.46 0.0 Alpha-glucan phosphorylase 2 cytosolic OS Arabidopsis thaliana GN PHS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LKJ3|PHSH_WHEAT 85 973 + 889 Gaps:77 98.08 832 62.99 0.0 Alpha-glucan phosphorylase H isozyme OS Triticum aestivum PE 2 SV 1
blastp_uniprot_sprot sp|P32811|PHSH_SOLTU 85 973 + 889 Gaps:86 97.49 838 61.57 0.0 Alpha-glucan phosphorylase H isozyme OS Solanum tuberosum PE 1 SV 1
blastp_uniprot_sprot sp|P06738|PHSG_YEAST 96 971 + 876 Gaps:115 91.91 902 48.13 0.0 Glycogen phosphorylase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN GPH1 PE 1 SV 4

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 559 973 415 PTHR11468:SF8 none none none
PANTHER 23 500 478 PTHR11468 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474";signature_desc=GLYCOGEN PHOSPHORYLASE none IPR000811
SUPERFAMILY 85 497 413 SSF53756 none none none
SUPERFAMILY 556 970 415 SSF53756 none none none
ProSitePatterns 811 823 13 PS00102 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474" Phosphorylase pyridoxal-phosphate attachment site. IPR000811
PANTHER 559 973 415 PTHR11468 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474";signature_desc=GLYCOGEN PHOSPHORYLASE none IPR000811
Gene3D 620 952 333 G3DSA:3.40.50.2000 none none none
Gene3D 556 619 64 G3DSA:3.40.50.2000 none none none
Gene3D 84 497 414 G3DSA:3.40.50.2000 none none none
PANTHER 23 500 478 PTHR11468:SF8 none none none
PIRSF 95 973 879 PIRSF000460 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474" none IPR000811
Pfam 173 497 325 PF00343 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474" Carbohydrate phosphorylase IPR000811
Pfam 546 969 424 PF00343 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474" Carbohydrate phosphorylase IPR000811

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 52   Mitochondrion 3 0.051 0.735 NON-PLANT 52