Protein : Qrob_P0002940.2 Q. robur
Protein Identifier  ? Qrob_P0002940.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) K18211 - synaptosomal-associated protein 25 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 309  
Kegg Orthology  K18211
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101226580 1 308 + 308 Gaps:16 100.00 302 73.18 2e-147 putative SNAP25 homologous protein SNAP30-like
blastp_kegg lcl|csv:101213250 1 308 + 308 Gaps:16 100.00 302 73.18 2e-147 putative SNAP25 homologous protein SNAP30-like
blastp_kegg lcl|cmo:103489173 1 308 + 308 Gaps:14 100.00 300 73.33 5e-147 putative SNAP25 homologous protein SNAP30
blastp_kegg lcl|sot:102601696 1 308 + 308 Gaps:4 100.00 306 68.30 4e-143 SNAP25 homologous protein SNAP33-like
blastp_kegg lcl|tcc:TCM_014158 1 308 + 308 Gaps:5 100.00 305 69.84 4e-140 Synaptosomal associated protein putative
blastp_kegg lcl|tcc:TCM_011581 1 308 + 308 Gaps:49 100.00 331 63.75 1e-135 Soluble N-ethylmaleimide-sensitive factor adaptor protein 30 isoform 1
blastp_kegg lcl|sly:101265526 1 308 + 308 Gaps:41 100.00 343 60.06 4e-135 SNAP25 homologous protein SNAP33-like
blastp_kegg lcl|pop:POPTR_0015s03450g 1 308 + 308 Gaps:5 100.00 305 66.23 2e-134 POPTRDRAFT_824554 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1470520 1 308 + 308 Gaps:5 100.00 305 65.57 1e-132 synaptosomal associated protein putative
blastp_kegg lcl|gmx:100809874 1 308 + 308 Gaps:10 100.00 300 67.33 2e-132 SNAP25 homologous protein SNAP33-like
blastp_pdb 1n7s_D 250 307 + 58 none 87.88 66 39.66 8e-07 mol:protein length:66 SNAP-25A
blastp_pdb 1urq_D 250 307 + 58 none 84.06 69 39.66 8e-07 mol:protein length:69 SYNAPTOSOMAL-ASSOCIATED PROTEIN 25
blastp_pdb 1sfc_L 250 307 + 58 none 66.67 87 39.66 9e-07 mol:protein length:87 PROTEIN (SNAP-25B)
blastp_pdb 1sfc_H 250 307 + 58 none 66.67 87 39.66 9e-07 mol:protein length:87 PROTEIN (SNAP-25B)
blastp_pdb 1sfc_D 250 307 + 58 none 66.67 87 39.66 9e-07 mol:protein length:87 PROTEIN (SNAP-25B)
blastp_pdb 3ipd_H 250 307 + 58 none 85.29 68 39.66 9e-07 mol:protein length:68 Synaptosomal-associated protein 25
blastp_pdb 3ipd_D 250 307 + 58 none 85.29 68 39.66 9e-07 mol:protein length:68 Synaptosomal-associated protein 25
blastp_pdb 3hd7_H 250 307 + 58 none 85.29 68 39.66 9e-07 mol:protein length:68 Synaptosomal-associated protein 25
blastp_pdb 3hd7_D 250 307 + 58 none 85.29 68 39.66 9e-07 mol:protein length:68 Synaptosomal-associated protein 25
blastp_pdb 1xtg_B 250 307 + 58 none 98.31 59 39.66 1e-06 mol:protein length:59 Synaptosomal-associated protein 25
blastp_uniprot_sprot sp|Q9LMG8|SNP30_ARATH 1 308 + 308 Gaps:45 100.00 263 70.72 4e-118 Putative SNAP25 homologous protein SNAP30 OS Arabidopsis thaliana GN SNAP30 PE 3 SV 1
blastp_uniprot_sprot sp|Q9S7P9|SNP33_ARATH 1 308 + 308 Gaps:14 100.00 300 63.33 3e-116 SNAP25 homologous protein SNAP33 OS Arabidopsis thaliana GN SNAP33 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SD96|SNP29_ARATH 58 308 + 251 Gaps:10 98.41 251 54.66 2e-80 SNAP25 homologous protein SNAP29 OS Arabidopsis thaliana GN SNAP29 PE 2 SV 1
blastp_uniprot_sprot sp|P36977|SN25A_CARAU 106 307 + 202 Gaps:18 94.12 204 29.69 2e-15 Synaptosomal-associated protein 25-A OS Carassius auratus GN snap25a PE 2 SV 1
blastp_uniprot_sprot sp|Q5TZ66|SN25A_DANRE 108 307 + 200 Gaps:18 93.14 204 29.47 1e-14 Synaptosomal-associated protein 25-A OS Danio rerio GN snap25a PE 2 SV 1
blastp_uniprot_sprot sp|Q6PC54|SN25B_DANRE 106 307 + 202 Gaps:21 94.09 203 29.84 4e-14 Synaptosomal-associated protein 25-B OS Danio rerio GN snap25b PE 2 SV 1
blastp_uniprot_sprot sp|P36978|SN25B_CARAU 108 307 + 200 Gaps:21 93.10 203 30.16 4e-14 Synaptosomal-associated protein 25-B OS Carassius auratus GN snap25b PE 2 SV 1
blastp_uniprot_sprot sp|P60881|SNP25_RAT 106 307 + 202 Gaps:32 94.17 206 29.38 8e-14 Synaptosomal-associated protein 25 OS Rattus norvegicus GN Snap25 PE 1 SV 1
blastp_uniprot_sprot sp|Q5R1X1|SNP25_PANTR 106 307 + 202 Gaps:32 94.17 206 29.38 8e-14 Synaptosomal-associated protein 25 OS Pan troglodytes GN SNAP25 PE 2 SV 1
blastp_uniprot_sprot sp|P60879|SNP25_MOUSE 106 307 + 202 Gaps:32 94.17 206 29.38 8e-14 Synaptosomal-associated protein 25 OS Mus musculus GN Snap25 PE 1 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 8 308 301 PTHR19305:SF0 none none none
Pfam 248 306 59 PF05739 none SNARE domain IPR000727
Gene3D 240 308 69 G3DSA:1.20.5.110 none none none
SUPERFAMILY 104 175 72 SSF58038 none none none
SUPERFAMILY 240 306 67 SSF58038 none none none
SMART 107 176 70 SM00397 none Helical region found in SNAREs IPR000727
SMART 238 305 68 SM00397 none Helical region found in SNAREs IPR000727
ProSiteProfiles 243 305 63 PS50192 none t-SNARE coiled-coil homology domain profile. IPR000727
Coils 274 302 29 Coil none none none
Gene3D 102 177 76 G3DSA:1.20.5.110 none none none
PANTHER 8 308 301 PTHR19305 none none none

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 81   Mitochondrion 5 0.044 0.556 NON-PLANT 81