Protein : Qrob_P0002890.2 Q. robur
Protein Identifier  ? Qrob_P0002890.2 Organism . Name  Quercus robur
Score  97.6 Score Type  egn
Protein Description  (M=22) PF01453//PF08276 - D-mannose binding lectin // PAN-like domain Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 395  
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0 Synonyms

0 GO Terms

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103325720 12 392 + 381 Gaps:9 48.44 801 45.36 2e-103 G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520
blastp_kegg lcl|pmum:103325788 22 385 + 364 Gaps:64 49.19 1549 47.51 2e-90 G-type lectin S-receptor-like serine/threonine-protein kinase CES101
blastp_kegg lcl|pmum:103325719 13 384 + 372 Gaps:29 48.83 809 43.04 6e-87 G-type lectin S-receptor-like serine/threonine-protein kinase CES101
blastp_kegg lcl|pper:PRUPE_ppa018599mg 12 370 + 359 Gaps:24 47.74 731 44.70 1e-85 hypothetical protein
blastp_kegg lcl|fve:101302120 1 392 + 392 Gaps:27 50.72 1532 41.44 4e-84 G-type lectin S-receptor-like serine/threonine-protein kinase B120-like
blastp_kegg lcl|vvi:100263838 14 361 + 348 Gaps:23 46.37 757 46.15 6e-83 G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520-like
blastp_kegg lcl|vvi:100253540 14 361 + 348 Gaps:23 44.15 795 46.72 2e-82 G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520-like
blastp_kegg lcl|pmum:103325782 1 368 + 368 Gaps:22 90.52 422 43.46 5e-82 G-type lectin S-receptor-like serine/threonine-protein kinase CES101
blastp_kegg lcl|pmum:103326178 10 390 + 381 Gaps:28 51.94 772 42.14 2e-81 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330
blastp_kegg lcl|pop:POPTR_0001s43260g 9 383 + 375 Gaps:27 50.93 754 41.67 6e-81 POPTRDRAFT_176754 hypothetical protein
blastp_uniprot_sprot sp|Q9LW83|CE101_ARATH 28 358 + 331 Gaps:46 43.41 850 32.52 1e-41 G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS Arabidopsis thaliana GN CES101 PE 2 SV 2
blastp_uniprot_sprot sp|O64793|Y1675_ARATH 28 358 + 331 Gaps:21 40.59 818 32.53 2e-38 G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS Arabidopsis thaliana GN At1g67520 PE 2 SV 3
blastp_uniprot_sprot sp|O81906|B120_ARATH 24 382 + 359 Gaps:68 47.94 849 28.26 1e-31 G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS Arabidopsis thaliana GN B120 PE 1 SV 1
blastp_uniprot_sprot sp|O64477|Y2913_ARATH 18 271 + 254 Gaps:7 31.04 828 33.07 2e-30 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS Arabidopsis thaliana GN At2g19130 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LPZ9|SD113_ARATH 18 382 + 365 Gaps:70 49.76 830 24.94 4e-28 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS Arabidopsis thaliana GN SD113 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SXB5|Y1135_ARATH 1 360 + 360 Gaps:59 49.39 820 25.93 3e-27 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11305 OS Arabidopsis thaliana GN At1g11305 PE 3 SV 1
blastp_uniprot_sprot sp|Q9ZR08|Y4230_ARATH 11 358 + 348 Gaps:91 46.36 852 30.38 5e-27 G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS Arabidopsis thaliana GN At4g03230 PE 3 SV 3
blastp_uniprot_sprot sp|Q9SY89|Y1661_ARATH 35 360 + 326 Gaps:73 44.54 842 27.20 1e-26 Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS Arabidopsis thaliana GN At1g61610 PE 3 SV 1
blastp_uniprot_sprot sp|P07761|SLSG6_BRAOL 8 266 + 259 Gaps:19 59.17 436 38.37 1e-26 S-locus-specific glycoprotein S6 OS Brassica oleracea GN SLSG PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZT07|RKS1_ARATH 18 359 + 342 Gaps:77 46.22 833 27.01 1e-26 G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS Arabidopsis thaliana GN RKS1 PE 3 SV 3
rpsblast_cdd gnl|CDD|201803 72 187 + 116 Gaps:12 99.08 109 43.52 2e-20 pfam01453 B_lectin D-mannose binding lectin. These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.
rpsblast_cdd gnl|CDD|28910 35 156 + 122 Gaps:8 98.28 116 37.72 5e-17 cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes such as cell-cell and host-pathogen interactions serum glycoprotein turnover and innate immune responses..
rpsblast_cdd gnl|CDD|128418 35 154 + 120 Gaps:9 97.37 114 37.84 9e-16 smart00108 B_lectin Bulb-type mannose-specific lectin.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 73 184 112 PF01453 none D-mannose binding lectin IPR001480
Phobius 1 26 26 SIGNAL_PEPTIDE none Signal peptide region none
SMART 27 156 130 SM00108 none Bulb-type mannose-specific lectin IPR001480
Phobius 22 26 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 28 162 135 G3DSA:2.90.10.10 none none IPR001480
SUPERFAMILY 75 182 108 SSF51110 none none IPR001480
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 27 394 368 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSiteProfiles 27 149 123 PS50927 none Bulb-type lectin domain profile. IPR001480
Pfam 301 360 60 PF08276 none PAN-like domain IPR013227
ProSiteProfiles 298 369 72 PS50948 none PAN/Apple domain profile. IPR003609

3 Localization

Analysis Start End Length
TMHMM 7 26 19
SignalP_GRAM_POSITIVE 1 24 23
SignalP_EUK 1 26 25

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 26   Secretory pathway 1 0.970 0.014 NON-PLANT 26