Protein : Qrob_P0002820.2 Q. robur
Protein Identifier  ? Qrob_P0002820.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=1) PTHR24420//PTHR24420:SF623 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 306  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103425471 1 305 + 305 Gaps:26 100.00 329 78.72 0.0 probable leucine-rich repeat receptor-like protein kinase At1g35710
blastp_kegg lcl|pxb:103947226 1 305 + 305 Gaps:28 99.40 333 79.46 0.0 probable leucine-rich repeat receptor-like protein kinase At1g35710
blastp_kegg lcl|pper:PRUPE_ppa008519mg 1 305 + 305 Gaps:25 100.00 328 79.88 0.0 hypothetical protein
blastp_kegg lcl|pmum:103321503 1 305 + 305 Gaps:25 100.00 328 79.88 0.0 probable leucine-rich repeat receptor-like protein kinase At1g35710
blastp_kegg lcl|fve:101292299 25 305 + 281 Gaps:24 92.71 329 82.30 2e-179 probable leucine-rich repeat receptor-like protein kinase At1g35710-like
blastp_kegg lcl|mdm:103414289 25 305 + 281 Gaps:24 91.59 333 81.31 4e-179 probable leucine-rich repeat receptor-like protein kinase At1g35710
blastp_kegg lcl|cam:101499639 3 305 + 303 Gaps:26 100.00 329 76.60 6e-178 probable leucine-rich repeat receptor-like protein kinase At1g35710-like
blastp_kegg lcl|vvi:100243945 1 304 + 304 Gaps:24 99.70 329 77.44 2e-177 probable leucine-rich repeat receptor-like protein kinase At1g35710
blastp_kegg lcl|gmx:100797744 3 305 + 303 Gaps:26 100.00 329 76.60 3e-176 probable leucine-rich repeat receptor-like protein kinase At1g35710-like
blastp_kegg lcl|mtr:MTR_5g043800 5 305 + 301 Gaps:26 99.39 329 76.76 9e-176 Leucine-rich repeat receptor protein kinase EXS
blastp_pdb 3rj0_A 65 295 + 231 Gaps:202 67.75 772 40.15 7e-19 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 65 295 + 231 Gaps:202 67.75 772 40.15 7e-19 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgz_A 65 295 + 231 Gaps:202 68.10 768 40.15 1e-18 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 65 295 + 231 Gaps:202 68.10 768 40.15 1e-18 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 1ogq_A 30 239 + 210 Gaps:14 66.45 313 32.69 1e-17 mol:protein length:313 POLYGALACTURONASE INHIBITING PROTEIN
blastp_pdb 1xec_B 98 283 + 186 Gaps:24 61.40 329 29.21 3e-09 mol:protein length:329 Decorin
blastp_pdb 1xec_A 98 283 + 186 Gaps:24 61.40 329 29.21 3e-09 mol:protein length:329 Decorin
blastp_pdb 1xcd_A 98 283 + 186 Gaps:24 61.40 329 29.21 3e-09 mol:protein length:329 Decorin
blastp_pdb 1xku_A 98 283 + 186 Gaps:24 61.21 330 29.21 3e-09 mol:protein length:330 Decorin
blastp_uniprot_sprot sp|Q8VZG8|Y4885_ARATH 16 299 + 284 Gaps:190 63.35 1045 50.76 3e-33 Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS Arabidopsis thaliana GN At4g08850 PE 1 SV 3
blastp_uniprot_sprot sp|Q9LP24|Y1571_ARATH 37 302 + 266 Gaps:111 63.12 1120 53.47 2e-32 Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS Arabidopsis thaliana GN At1g35710 PE 2 SV 1
blastp_uniprot_sprot sp|Q00874|DR100_ARATH 30 299 + 270 Gaps:87 88.71 372 50.30 6e-32 DNA-damage-repair/toleration protein DRT100 OS Arabidopsis thaliana GN DRT100 PE 2 SV 2
blastp_uniprot_sprot sp|C0LGV1|RCH1_ARATH 1 295 + 295 Gaps:89 62.03 1135 49.29 2e-31 LRR receptor-like serine/threonine-protein kinase RCH1 OS Arabidopsis thaliana GN RCH1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SHI2|Y1723_ARATH 5 303 + 299 Gaps:104 61.94 1101 53.52 2e-31 Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS Arabidopsis thaliana GN At1g17230 PE 2 SV 2
blastp_uniprot_sprot sp|Q9C9H7|RLP12_ARATH 5 287 + 283 Gaps:129 84.53 847 47.35 6e-31 Receptor-like protein 12 OS Arabidopsis thaliana GN RLP12 PE 2 SV 2
blastp_uniprot_sprot sp|P93194|RPK1_IPONI 46 303 + 258 Gaps:142 61.32 1109 51.32 1e-30 Receptor-like protein kinase OS Ipomoea nil GN INRPK1 PE 2 SV 2
blastp_uniprot_sprot sp|C0LGQ5|GSO1_ARATH 28 300 + 273 Gaps:239 65.89 1249 51.52 1e-30 LRR receptor-like serine/threonine-protein kinase GSO1 OS Arabidopsis thaliana GN GSO1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SGP2|HSL1_ARATH 27 303 + 277 Gaps:73 58.13 996 46.98 2e-30 Receptor-like protein kinase HSL1 OS Arabidopsis thaliana GN HSL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M2Z1|BAME2_ARATH 59 303 + 245 Gaps:107 53.49 1002 52.80 8e-30 Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS Arabidopsis thaliana GN BAM2 PE 1 SV 1
rpsblast_cdd gnl|CDD|177728 64 300 + 237 Gaps:68 54.75 968 54.34 8e-31 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 6 17 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 18 25 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 1 283 283 PTHR24420 none none none
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 1 283 283 PTHR24420:SF623 none none none
SUPERFAMILY 59 298 240 SSF52058 none none none
Pfam 125 184 60 PF13855 none Leucine rich repeat IPR001611
Pfam 199 259 61 PF13855 none Leucine rich repeat IPR001611
Gene3D 63 285 223 G3DSA:3.80.10.10 none none none
Pfam 102 122 21 PF00560 none Leucine Rich Repeat IPR001611
SMART 147 171 25 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 99 123 25 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 246 270 25 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 222 245 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
Phobius 26 305 280 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

1 Localization

Analysis Start End Length
SignalP_EUK 1 25 24

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Secretory pathway 2 0.861 0.199 NON-PLANT 25