Protein : Qrob_P0002790.2 Q. robur
Protein Identifier  ? Qrob_P0002790.2 Organism . Name  Quercus robur
Score  6.0 Score Type  egn
Protein Description  (M=2) PTHR31471:SF5 - F7A19.1 PROTEIN-RELATED (PTHR31471:SF5) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 279  
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0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103321507 1 278 + 278 Gaps:50 84.50 329 47.12 8e-52 uncharacterized protein At3g61260-like
blastp_kegg lcl|pper:PRUPE_ppa017471mg 1 278 + 278 Gaps:42 94.88 293 45.68 2e-51 hypothetical protein
blastp_kegg lcl|mdm:103414288 2 278 + 277 Gaps:62 82.52 326 45.72 5e-43 remorin-like
blastp_kegg lcl|mdm:103451780 2 278 + 277 Gaps:62 82.52 326 45.72 5e-43 remorin-like
blastp_kegg lcl|pxb:103947229 2 278 + 277 Gaps:58 82.62 328 46.13 6e-43 uncharacterized protein At3g61260
blastp_kegg lcl|fve:101293779 1 278 + 278 Gaps:65 83.73 338 42.05 2e-40 uncharacterized protein LOC101293779
blastp_kegg lcl|cic:CICLE_v10033969mg 1 278 + 278 Gaps:53 84.99 373 38.17 3e-37 hypothetical protein
blastp_kegg lcl|tcc:TCM_011588 1 278 + 278 Gaps:78 99.66 291 43.79 4e-37 Remorin family protein
blastp_kegg lcl|cit:102616806 31 278 + 248 Gaps:52 70.97 403 36.71 1e-32 hepatoma-derived growth factor-related protein 2-like
blastp_kegg lcl|vvi:100249028 1 278 + 278 Gaps:76 100.00 322 34.47 5e-31 uncharacterized LOC100249028

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 180 275 96 PF03763 none Remorin, C-terminal region IPR005516
PANTHER 4 277 274 PTHR31471:SF5 none none none
PANTHER 4 277 274 PTHR31471 none none none

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting