Protein : Qrob_P0002680.2 Q. robur
Protein Identifier  ? Qrob_P0002680.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) PTHR13018:SF31 - LIPASE/HYDROLASE (PTHR13018:SF31) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 648  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100267828 1 646 + 646 Gaps:58 94.28 717 56.36 0.0 uncharacterized LOC100267828
blastp_kegg lcl|pop:POPTR_0002s11450g 1 644 + 644 Gaps:58 92.66 736 55.13 0.0 POPTRDRAFT_1071903 early-responsive to dehydration family protein
blastp_kegg lcl|tcc:TCM_034636 1 644 + 644 Gaps:59 94.34 724 55.34 0.0 Lipases hydrolases acting on ester bonds isoform 1
blastp_kegg lcl|gmx:100789875 1 644 + 644 Gaps:62 92.20 744 53.06 0.0 uncharacterized LOC100789875
blastp_kegg lcl|pmum:103320509 1 644 + 644 Gaps:62 92.41 738 55.57 0.0 uncharacterized membrane protein YLR241W
blastp_kegg lcl|gmx:100796574 1 646 + 646 Gaps:60 91.47 750 53.50 0.0 uncharacterized LOC100796574
blastp_kegg lcl|pvu:PHAVU_009G074900g 1 644 + 644 Gaps:52 91.74 678 56.91 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_001G031900g 1 646 + 646 Gaps:60 95.15 721 53.64 0.0 hypothetical protein
blastp_kegg lcl|gmx:100814561 1 646 + 646 Gaps:60 91.47 750 52.62 0.0 uncharacterized LOC100814561
blastp_kegg lcl|cam:101492212 1 646 + 646 Gaps:62 88.52 775 53.79 0.0 uncharacterized LOC101492212
blastp_uniprot_sprot sp|Q09809|YAB9_SCHPO 241 599 + 359 Gaps:21 44.39 793 23.58 5e-19 Uncharacterized membrane protein C2G11.09 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC2G11.09 PE 3 SV 2
blastp_uniprot_sprot sp|Q06538|YL241_YEAST 249 627 + 379 Gaps:18 47.70 782 24.13 8e-19 Uncharacterized membrane protein YLR241W OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN YLR241W PE 1 SV 1
blastp_uniprot_sprot sp|Q03516|RSN1_YEAST 249 583 + 335 Gaps:45 34.84 953 27.71 2e-14 Uncharacterized protein RSN1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN RSN1 PE 1 SV 1
blastp_uniprot_sprot sp|Q09766|YA7D_SCHPO 283 611 + 329 Gaps:34 37.31 871 25.23 4e-12 Uncharacterized membrane protein C24H6.13 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC24H6.13 PE 1 SV 1
blastp_uniprot_sprot sp|Q12252|PHM7_YEAST 283 635 + 353 Gaps:47 37.13 991 23.10 2e-09 Phosphate metabolism protein 7 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN PHM7 PE 1 SV 1
rpsblast_cdd gnl|CDD|190398 250 578 + 329 Gaps:16 100.00 325 32.62 7e-64 pfam02714 DUF221 Domain of unknown function DUF221. This family consists of hypothetical transmembrane proteins none of which have any function the aligned region is at 538 residues at maximum length.
rpsblast_cdd gnl|CDD|35153 249 613 + 365 Gaps:15 43.77 827 27.62 9e-38 COG5594 COG5594 Uncharacterized integral membrane protein [Function unknown].
rpsblast_cdd gnl|CDD|206137 11 155 + 145 Gaps:8 96.03 151 36.55 2e-21 pfam13967 RSN1_TM Late exocytosis associated with Golgi transport. This family represents the first three transmembrane regions of 11-TM proteins involved in vesicle transport. In S. cerevisiae these proteins are members of the yeast facilitator superfamily and are integral membrane proteins localised to the cell periphery in particular to the bud-neck region. The distribution is consistent with a role in late exocytosis which is in agreement with the proteins' ability to substitute for the function of Sro7p required for the sorting of the protein Enap1 into Golgi-derived vesicles destined for the cell surface.
rpsblast_kog gnl|CDD|36349 21 646 + 626 Gaps:73 93.27 728 31.81 2e-99 KOG1134 KOG1134 KOG1134 Uncharacterized conserved protein [General function prediction only].

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 455 477 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 605 647 43 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 250 578 329 PF02714 none Domain of unknown function DUF221 IPR003864
PANTHER 12 645 634 PTHR13018:SF31 none none none
Phobius 531 584 54 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 401 424 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 80 104 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 155 305 151 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 425 454 30 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 306 327 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 105 133 29 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 585 604 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 505 530 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 11 154 144 PF13967 none Late exocytosis, associated with Golgi transport none
Phobius 28 79 52 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 382 400 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 328 359 32 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 134 154 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 360 381 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 478 504 27 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 6 27 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 12 645 634 PTHR13018 none none none

9 Localization

Analysis Start End Length
TMHMM 402 424 22
TMHMM 132 154 22
TMHMM 558 580 22
TMHMM 505 527 22
TMHMM 304 326 22
TMHMM 84 106 22
TMHMM 456 478 22
TMHMM 5 27 22
TMHMM 359 381 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Secretory pathway 1 0.942 0.023 NON-PLANT 25