Protein : Qrob_P0002670.2 Q. robur
Protein Identifier  ? Qrob_P0002670.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11106//PTHR11106:SF27 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 227  
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0 Synonyms

0 GO Terms

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_011601 1 179 + 179 Gaps:36 38.46 559 66.98 2e-85 Appr-1-p processing enzyme family protein isoform 1
blastp_kegg lcl|fve:101293479 1 179 + 179 Gaps:39 38.79 562 64.22 1e-80 protein GDAP2 homolog
blastp_kegg lcl|cit:102618722 1 179 + 179 Gaps:37 38.57 560 63.89 6e-78 protein GDAP2 homolog
blastp_kegg lcl|cic:CICLE_v10033452mg 1 179 + 179 Gaps:37 37.70 573 63.89 2e-77 hypothetical protein
blastp_kegg lcl|pop:POPTR_0010s16890g 1 179 + 179 Gaps:38 38.68 561 61.75 5e-76 POPTRDRAFT_769957 appr-1-p processing enzyme family protein
blastp_kegg lcl|vvi:100247494 1 179 + 179 Gaps:37 38.57 560 61.11 2e-75 protein GDAP2 homolog-like
blastp_kegg lcl|pop:POPTR_0008s09270g 1 179 + 179 Gaps:38 38.68 561 60.83 3e-74 POPTRDRAFT_765804 appr-1-p processing enzyme family protein
blastp_kegg lcl|mdm:103402844 1 179 + 179 Gaps:39 38.79 562 63.76 3e-74 protein GDAP2 homolog
blastp_kegg lcl|rcu:RCOM_1717970 7 179 + 173 Gaps:39 37.43 561 61.90 2e-73 ganglioside induced differentiation associated protein putative
blastp_kegg lcl|rcu:RCOM_1750580 7 179 + 173 Gaps:15 58.78 279 73.17 3e-73 ganglioside induced differentiation associated protein putative
blastp_pdb 2x47_A 23 132 + 110 Gaps:28 35.74 235 41.67 8e-08 mol:protein length:235 MACRO DOMAIN-CONTAINING PROTEIN 1
blastp_uniprot_sprot sp|A7T167|GDAP2_NEMVE 15 179 + 165 Gaps:59 36.65 502 29.89 1e-12 Protein GDAP2 homolog OS Nematostella vectensis GN gdap2 PE 3 SV 1
blastp_uniprot_sprot sp|Q922B1|MACD1_MOUSE 23 133 + 111 Gaps:28 26.32 323 41.18 7e-08 O-acetyl-ADP-ribose deacetylase MACROD1 OS Mus musculus GN Macrod1 PE 1 SV 2
blastp_uniprot_sprot sp|Q2KHU5|MACD1_BOVIN 23 133 + 111 Gaps:28 26.15 325 41.18 7e-08 O-acetyl-ADP-ribose deacetylase MACROD1 OS Bos taurus GN MACROD1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9BQ69|MACD1_HUMAN 23 143 + 121 Gaps:28 29.23 325 37.89 3e-07 O-acetyl-ADP-ribose deacetylase MACROD1 OS Homo sapiens GN MACROD1 PE 1 SV 2
blastp_uniprot_sprot sp|Q8K4G6|MACD1_RAT 23 133 + 111 Gaps:28 32.95 258 40.00 7e-07 O-acetyl-ADP-ribose deacetylase MACROD1 (Fragment) OS Rattus norvegicus GN Macrod1 PE 2 SV 2
blastp_uniprot_sprot sp|Q7JUR6|GDAP2_DROME 57 179 + 123 Gaps:38 29.81 540 27.33 2e-06 Protein GDAP2 homolog OS Drosophila melanogaster GN CG18812 PE 2 SV 1
blastp_uniprot_sprot sp|Q5CZL1|GDAP2_XENTR 63 179 + 117 Gaps:37 31.05 496 26.62 3e-06 Ganglioside-induced differentiation-associated protein 2 OS Xenopus tropicalis PE 2 SV 1
rpsblast_cdd gnl|CDD|28845 82 179 + 98 Gaps:37 96.43 140 32.59 7e-21 cd02905 Macro_GDAP2_like Macro domain GDAP2_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity the macro domain may play roles in distinct ADP-ribose pathways such as the ADP-ribosylation of proteins an important post-translational modification which occurs in DNA repair transcription chromatin biology and long-term memory formation among other processes. This family contains proteins similar to human GDAP2 the ganglioside induced differentiation associated protein 2 whose gene is expressed at a higher level in differentiated Neuro2a cells compared with non-differentiated cells. GDAP2 contains an N-terminal macro domain and a C-terminal Sec14p-like lipid binding domain. It is specifically expressed in brain and testis..
rpsblast_cdd gnl|CDD|28848 83 179 + 97 Gaps:46 80.61 165 30.08 7e-09 cd02908 Macro_Appr_pase_like Macro domain Appr-1"-pase_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity the macro domain may play roles in distinct ADP-ribose pathways such as the ADP-ribosylation of proteins an important post-translational modification which occurs in DNA repair transcription chromatin biology and long-term memory formation among other processes. This family is composed of uncharacterized proteins that show similarity to Appr-1"-pase containing conserved putative active site residues. Appr-1"-pase is a phosphatase specific for ADP-ribose-1"-monophosphate..
rpsblast_kog gnl|CDD|37844 63 179 + 117 Gaps:40 73.50 200 27.89 3e-18 KOG2633 KOG2633 KOG2633 Hismacro and SEC14 domain-containing proteins [Chromatin structure and dynamics Transcription].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 59 128 70 PTHR11106 none none none
PANTHER 17 34 18 PTHR11106 none none none
Gene3D 71 132 62 G3DSA:3.40.220.10 none none none
SUPERFAMILY 72 182 111 SSF52949 none none none
PANTHER 17 34 18 PTHR11106:SF27 none none none
PANTHER 59 128 70 PTHR11106:SF27 none none none

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting