Protein : Qrob_P0002530.2 Q. robur
Protein Identifier  ? Qrob_P0002530.2 Organism . Name  Quercus robur
Protein Description  (M=22) KOG0444//KOG0618//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Apoptotic ATPase [Signal transduction mechanisms]. Alias (in v1)  Qrob_P0199835.1
Gene Prediction Quality  manual_v2 Protein length 

Sequence

Length: 660  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa020421mg 1 425 + 425 Gaps:53 44.09 880 39.18 2e-66 hypothetical protein
blastp_kegg lcl|gmx:100798893 1 443 + 443 Gaps:59 27.32 1464 40.75 8e-66 TMV resistance protein N-like
blastp_kegg lcl|pvu:PHAVU_005G016500g 1 443 + 443 Gaps:52 32.68 1221 38.60 5e-65 hypothetical protein
blastp_kegg lcl|pmum:103331079 1 433 + 433 Gaps:59 37.89 1156 39.50 1e-64 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa022914mg 1 421 + 421 Gaps:69 44.90 873 40.31 7e-64 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa024831mg 1 446 + 446 Gaps:70 46.09 894 40.05 1e-63 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa017937mg 1 446 + 446 Gaps:70 46.09 894 40.05 1e-63 hypothetical protein
blastp_kegg lcl|fve:101295863 1 433 + 433 Gaps:73 34.16 1212 38.16 2e-63 TMV resistance protein N-like
blastp_kegg lcl|pop:POPTR_0019s01640g 1 418 + 418 Gaps:62 43.84 885 39.18 5e-63 hypothetical protein
blastp_kegg lcl|cam:101496656 1 445 + 445 Gaps:57 28.63 1404 39.05 6e-62 TMV resistance protein N-like
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 1 409 + 409 Gaps:80 18.31 1895 39.48 3e-39 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 1 652 + 652 Gaps:114 56.64 1144 26.39 5e-33 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 1 311 + 311 Gaps:65 25.21 1095 35.87 7e-26 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 1 440 + 440 Gaps:189 51.35 1301 43.86 1e-22 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 1 311 + 311 Gaps:70 27.04 1372 29.65 2e-21 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 1 328 + 328 Gaps:81 29.11 1288 32.80 6e-20 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 1 350 + 350 Gaps:79 24.49 1613 28.10 4e-15 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|P0CB16|DRL25_ARATH 119 420 + 302 Gaps:119 36.47 1201 42.24 4e-13 Putative disease resistance protein At4g19050 OS Arabidopsis thaliana GN At4g19050 PE 3 SV 2
blastp_uniprot_sprot sp|Q9LRV8|PIRL2_ARATH 160 356 + 197 Gaps:28 40.13 471 32.28 2e-08 Plant intracellular Ras-group-related LRR protein 2 OS Arabidopsis thaliana GN PIRL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VZC7|DRL36_ARATH 224 341 + 118 Gaps:5 9.74 1222 38.66 3e-08 Probable disease resistance protein At5g45510 OS Arabidopsis thaliana GN At5g45510 PE 1 SV 2
rpsblast_cdd gnl|CDD|178749 1 535 + 535 Gaps:170 42.41 1153 34.36 3e-43 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_kog gnl|CDD|39857 134 446 + 313 Gaps:73 37.46 889 33.63 4e-15 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35665 106 421 + 316 Gaps:136 26.06 1255 39.45 4e-10 KOG0444 KOG0444 KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton].
rpsblast_kog gnl|CDD|35838 68 404 + 337 Gaps:93 32.19 1081 25.00 5e-10 KOG0618 KOG0618 KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms].

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 4 778 775 PTHR11017 none none none
SUPERFAMILY 11 164 154 SSF52200 none none IPR000157
SUPERFAMILY 183 426 244 SSF52540 none none IPR027417
Gene3D 526 897 372 G3DSA:3.80.10.10 none none none
PANTHER 4 778 775 PTHR11017:SF146 none none none
ProSiteProfiles 20 161 142 PS50104 none TIR domain profile. IPR000157
SUPERFAMILY 431 503 73 SSF46785 none none none
Pfam 204 438 235 PF00931 none NB-ARC domain IPR002182
Gene3D 216 370 155 G3DSA:3.40.50.300 none none IPR027417
Pfam 842 860 19 PF00560 none Leucine Rich Repeat IPR001611
Pfam 625 643 19 PF00560 none Leucine Rich Repeat IPR001611
Pfam 716 734 19 PF00560 none Leucine Rich Repeat IPR001611
Pfam 669 691 23 PF00560 none Leucine Rich Repeat IPR001611
Gene3D 19 157 139 G3DSA:3.40.50.10140 none none IPR000157
PRINTS 390 404 15 PR00364 none Disease resistance protein signature none
PRINTS 621 637 17 PR00364 none Disease resistance protein signature none
PRINTS 295 309 15 PR00364 none Disease resistance protein signature none
PRINTS 220 235 16 PR00364 none Disease resistance protein signature none
Pfam 24 154 131 PF01582 none TIR domain IPR000157
SUPERFAMILY 514 900 387 SSF52058 none none none
SMART 21 161 141 SM00255 none Toll - interleukin 1 - resistance IPR000157

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting