Protein : Qrob_P0002240.2 Q. robur
Protein Identifier  ? Qrob_P0002240.2 Organism . Name  Quercus robur
Score  81.2 Score Type  egn
Protein Description  (M=5) PTHR11527//PTHR11527:SF98 - SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 286  
Kegg Orthology  K13993
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Protein Sequence Displayer

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0 Synonyms

0 GO Terms

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100267696 1 285 + 285 Gaps:43 95.75 259 65.73 2e-100 uncharacterized LOC100267696
blastp_kegg lcl|pmum:103328256 1 285 + 285 Gaps:54 95.53 246 67.66 6e-99 uncharacterized LOC103328256
blastp_kegg lcl|pper:PRUPE_ppa010560mg 1 285 + 285 Gaps:55 95.51 245 68.38 4e-97 hypothetical protein
blastp_kegg lcl|tcc:TCM_001785 1 285 + 285 Gaps:49 77.71 314 63.52 5e-86 Alpha-crystallin domain 32.1 putative isoform 1
blastp_kegg lcl|rcu:RCOM_0539830 1 285 + 285 Gaps:57 95.58 249 62.61 1e-81 small heat-shock protein putative
blastp_kegg lcl|mtr:MTR_5g091960 1 285 + 285 Gaps:43 95.75 259 56.45 6e-80 Small heat shock protein C4
blastp_kegg lcl|cam:101488254 1 285 + 285 Gaps:42 95.77 260 54.22 5e-79 uncharacterized LOC101488254
blastp_kegg lcl|pvu:PHAVU_008G264700g 1 285 + 285 Gaps:54 95.04 262 54.22 1e-75 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10012533mg 1 285 + 285 Gaps:38 99.27 273 51.29 9e-72 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s13790g 1 285 + 285 Gaps:60 95.86 266 55.29 9e-70 POPTRDRAFT_572838 A-crystallin domain-containing family protein
blastp_uniprot_sprot sp|Q4UKR8|HSPC2_RICFE 197 284 + 88 Gaps:7 52.60 154 37.04 3e-11 Small heat shock protein C2 OS Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN hspC2 PE 3 SV 1
blastp_uniprot_sprot sp|Q4UJB1|HSPC4_RICFE 195 284 + 90 Gaps:7 50.92 163 34.94 4e-08 Small heat shock protein C4 OS Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN hspc4-1 PE 3 SV 1
blastp_uniprot_sprot sp|Q54VP4|Y0215_DICDI 195 284 + 90 Gaps:15 19.95 416 32.53 1e-06 Heat shock protein DDB_G0280215 OS Dictyostelium discoideum GN DDB_G0280215 PE 3 SV 1
rpsblast_cdd gnl|CDD|107221 200 284 + 85 Gaps:8 87.50 88 32.47 4e-14 cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps..
rpsblast_cdd gnl|CDD|30420 187 284 + 98 Gaps:7 62.33 146 24.18 4e-12 COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification protein turnover chaperones].
rpsblast_cdd gnl|CDD|107219 201 284 + 84 Gaps:15 86.25 80 31.88 4e-10 cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins. sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind1) NUD (nuclear distribution) C Melusin and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR)..
rpsblast_kog gnl|CDD|35929 187 284 + 98 Gaps:6 47.96 196 27.66 2e-07 KOG0710 KOG0710 KOG0710 Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [Posttranslational modification protein turnover chaperones].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 193 284 92 G3DSA:2.60.40.790 none none IPR008978
PANTHER 194 284 91 PTHR11527 none none IPR031107
PANTHER 194 284 91 PTHR11527:SF98 none none none
ProSiteProfiles 200 285 86 PS01031 none Heat shock hsp20 proteins family profile. IPR002068
SUPERFAMILY 191 284 94 SSF49764 none none IPR008978
Pfam 201 283 83 PF00011 none Hsp20/alpha crystallin family IPR002068

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting