Protein : Qrob_P0002200.2 Q. robur
Protein Identifier  ? Qrob_P0002200.2 Organism . Name  Quercus robur
Score  45.2 Score Type  egn
Protein Description  (M=274) PF01453 - D-mannose binding lectin Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 621  
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0 Synonyms

0 GO Terms

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100256499 30 620 + 591 Gaps:36 72.24 832 53.74 7e-152 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like
blastp_kegg lcl|cit:102607322 17 620 + 604 Gaps:44 74.91 845 51.66 6e-148 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like
blastp_kegg lcl|sly:101260740 12 620 + 609 Gaps:47 75.06 834 48.88 6e-146 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like
blastp_kegg lcl|cit:102608576 17 620 + 604 Gaps:44 74.91 845 50.87 5e-144 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like
blastp_kegg lcl|cit:102609162 17 620 + 604 Gaps:44 74.91 845 50.24 2e-141 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like
blastp_kegg lcl|vvi:100257381 12 620 + 609 Gaps:48 75.12 848 51.96 3e-140 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like
blastp_kegg lcl|rcu:RCOM_0539370 4 620 + 617 Gaps:57 75.99 837 50.63 3e-140 serine-threonine protein kinase plant-type putative (EC:2.7.11.25)
blastp_kegg lcl|rcu:RCOM_0538930 8 593 + 586 Gaps:55 70.92 870 50.57 3e-136 serine-threonine protein kinase plant-type putative (EC:2.7.11.25)
blastp_kegg lcl|rcu:RCOM_0539160 4 426 + 423 Gaps:41 96.72 457 50.68 9e-133 S-locus-specific glycoprotein precursor putative
blastp_kegg lcl|cit:102610546 1 423 + 423 Gaps:49 98.91 457 50.44 5e-131 G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370-like
blastp_uniprot_sprot sp|O65238|Y5537_ARATH 96 494 + 399 Gaps:89 49.54 872 28.70 5e-28 G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS Arabidopsis thaliana GN At5g35370 PE 2 SV 2
blastp_uniprot_sprot sp|Q8RWZ5|SD25_ARATH 65 578 + 514 Gaps:71 64.92 821 29.27 5e-26 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS Arabidopsis thaliana GN SD25 PE 1 SV 1
blastp_uniprot_sprot sp|P17801|KPRO_MAIZE 80 402 + 323 Gaps:51 41.62 817 27.35 1e-22 Putative receptor protein kinase ZmPK1 OS Zea mays GN PK1 PE 2 SV 2
blastp_uniprot_sprot sp|Q39688|EP1G_DAUCA 70 306 + 237 Gaps:63 74.55 389 30.69 1e-22 Epidermis-specific secreted glycoprotein EP1 OS Daucus carota GN EP1 PE 1 SV 1
blastp_uniprot_sprot sp|O64477|Y2913_ARATH 102 451 + 350 Gaps:70 45.65 828 28.84 4e-21 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS Arabidopsis thaliana GN At2g19130 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S972|SD16_ARATH 102 465 + 364 Gaps:66 45.34 847 28.91 9e-20 Receptor-like serine/threonine-protein kinase SD1-6 OS Arabidopsis thaliana GN SD16 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LZR8|Y5370_ARATH 100 476 + 377 Gaps:95 77.18 482 26.34 7e-19 PAN domain-containing protein At5g03700 OS Arabidopsis thaliana GN At5g03700 PE 4 SV 1
blastp_uniprot_sprot sp|Q9XID3|Y1343_ARATH 102 582 + 481 Gaps:69 64.05 829 26.55 4e-18 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS Arabidopsis thaliana GN At1g34300 PE 1 SV 1
blastp_uniprot_sprot sp|O81906|B120_ARATH 96 472 + 377 Gaps:67 46.64 849 25.76 5e-18 G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS Arabidopsis thaliana GN B120 PE 1 SV 1
blastp_uniprot_sprot sp|Q39086|SD17_ARATH 102 481 + 380 Gaps:59 47.09 843 26.70 2e-17 Receptor-like serine/threonine-protein kinase SD1-7 OS Arabidopsis thaliana GN SD17 PE 1 SV 1
rpsblast_cdd gnl|CDD|201803 102 183 + 82 Gaps:2 77.06 109 51.19 3e-22 pfam01453 B_lectin D-mannose binding lectin. These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.
rpsblast_cdd gnl|CDD|128418 102 172 + 71 Gaps:1 63.16 114 48.61 5e-15 smart00108 B_lectin Bulb-type mannose-specific lectin.
rpsblast_cdd gnl|CDD|28910 102 173 + 72 Gaps:1 62.93 116 46.58 6e-15 cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes such as cell-cell and host-pathogen interactions serum glycoprotein turnover and innate immune responses..
rpsblast_kog gnl|CDD|36401 493 580 + 88 Gaps:1 24.65 361 34.83 4e-10 KOG1187 KOG1187 KOG1187 Serine/threonine protein kinase [Signal transduction mechanisms].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 102 306 205 PTHR32444 none none none
Phobius 465 620 156 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 15 22 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 23 439 417 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 100 226 127 SSF51110 none none IPR001480
Phobius 3 14 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SMART 53 173 121 SM00108 none Bulb-type mannose-specific lectin IPR001480
ProSiteProfiles 335 416 82 PS50948 none PAN/Apple domain profile. IPR003609
PANTHER 102 306 205 PTHR32444:SF5 none none none
Gene3D 99 179 81 G3DSA:2.90.10.10 none none IPR001480
Pfam 101 187 87 PF01453 none D-mannose binding lectin IPR001480
Phobius 440 464 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 41 171 131 PS50927 none Bulb-type lectin domain profile. IPR001480

2 Localization

Analysis Start End Length
TMHMM 442 464 22
SignalP_EUK 1 22 21

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 1 0.993 0.011 NON-PLANT 22