Protein : Qrob_P0001970.2 Q. robur
Protein Identifier  ? Qrob_P0001970.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=460) PTHR11017//PTHR11017:SF146 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 162  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa016235mg 17 154 + 138 Gaps:10 62.45 237 60.81 2e-51 hypothetical protein
blastp_kegg lcl|mdm:103415309 10 161 + 152 Gaps:10 84.38 192 54.32 8e-51 putative disease resistance protein At4g11170
blastp_kegg lcl|cic:CICLE_v10023609mg 10 150 + 141 Gaps:10 79.89 189 56.95 2e-50 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10024482mg 10 151 + 142 Gaps:9 28.98 521 58.28 3e-50 hypothetical protein
blastp_kegg lcl|pop:POPTR_0019s00880g 16 150 + 135 Gaps:11 89.57 163 60.96 3e-50 POPTRDRAFT_247935 hypothetical protein
blastp_kegg lcl|cit:102628111 18 150 + 133 Gaps:7 84.34 166 57.14 6e-50 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10023769mg 10 151 + 142 Gaps:10 96.20 158 55.26 8e-50 hypothetical protein
blastp_kegg lcl|fve:101290837 1 154 + 154 Gaps:16 50.90 334 53.53 8e-50 TMV resistance protein N-like
blastp_kegg lcl|pmum:103335448 4 152 + 149 Gaps:10 72.27 220 55.97 2e-49 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v100186892m 10 151 + 142 Gaps:10 96.82 157 55.92 2e-49 hypothetical protein
blastp_pdb 3jrn_A 12 149 + 138 Gaps:11 83.52 176 45.58 1e-32 mol:protein length:176 AT1G72930 protein
blastp_pdb 3ozi_B 11 151 + 141 Gaps:10 74.02 204 41.72 1e-28 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 11 151 + 141 Gaps:10 74.02 204 41.72 1e-28 mol:protein length:204 L6tr
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 16 149 + 134 Gaps:11 12.67 1144 53.79 3e-40 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 10 151 + 142 Gaps:8 13.70 1095 45.33 2e-32 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 12 149 + 138 Gaps:11 83.52 176 45.58 5e-32 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 11 150 + 140 Gaps:11 11.30 1301 40.82 3e-24 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 21 154 + 134 Gaps:11 40.40 354 34.97 2e-18 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 18 157 + 140 Gaps:11 26.09 571 33.56 5e-18 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C5Q9|P2A05_ARATH 21 147 + 127 Gaps:11 33.09 411 34.56 2e-15 Protein PHLOEM PROTEIN 2-LIKE A5 OS Arabidopsis thaliana GN PP2A5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FHE8|P2A06_ARATH 21 119 + 99 Gaps:2 25.26 392 41.41 2e-14 Protein PHLOEM PROTEIN 2-LIKE A6 OS Arabidopsis thaliana GN PP2A6 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 10 151 + 142 Gaps:10 13.01 1153 42.00 3e-33 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201870 21 142 + 122 Gaps:13 100.00 135 40.74 7e-29 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|197607 18 147 + 130 Gaps:12 100.00 140 40.00 7e-26 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|178736 7 153 + 147 Gaps:7 75.94 187 31.69 3e-12 PLN03194 PLN03194 putative disease resistance protein Provisional.
rpsblast_cdd gnl|CDD|205852 21 109 + 89 Gaps:5 82.35 102 25.00 4e-08 pfam13676 TIR_2 TIR domain. This is a family of bacterial Toll-like receptors.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 9 150 142 SSF52200 none none IPR000157
PANTHER 9 156 148 PTHR11017 none none none
SMART 18 147 130 SM00255 none Toll - interleukin 1 - resistance IPR000157
Gene3D 16 141 126 G3DSA:3.40.50.10140 none none IPR000157
Pfam 21 136 116 PF01582 none TIR domain IPR000157
PANTHER 9 156 148 PTHR11017:SF146 none none none
ProSiteProfiles 17 147 131 PS50104 none TIR domain profile. IPR000157

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting