Protein : Qrob_P0001920.2 Q. robur
Protein Identifier  ? Qrob_P0001920.2 Organism . Name  Quercus robur
Score  98.1 Score Type  egn
Protein Description  (M=1) K00249 - acyl-CoA dehydrogenase [EC:1.3.99.3] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 852  
Kegg Orthology  K00249
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003995 acyl-CoA dehydrogenase activity Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor.
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.

46 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_021252 1 851 + 851 Gaps:24 100.00 827 80.29 0.0 Acyl-CoA dehydrogenase-related isoform 1
blastp_kegg lcl|fve:101298511 15 850 + 836 Gaps:20 99.39 821 80.02 0.0 acyl-CoA dehydrogenase family member 10-like
blastp_kegg lcl|pper:PRUPE_ppa001473mg 18 851 + 834 Gaps:23 99.14 818 81.87 0.0 hypothetical protein
blastp_kegg lcl|pxb:103943694 18 851 + 834 Gaps:23 98.90 820 81.13 0.0 acyl-CoA dehydrogenase family member 10
blastp_kegg lcl|mdm:103430775 18 851 + 834 Gaps:23 98.90 820 80.76 0.0 acyl-CoA dehydrogenase family member 10-like
blastp_kegg lcl|rcu:RCOM_0682080 1 851 + 851 Gaps:21 100.00 830 78.31 0.0 protein with unknown function (EC:1.3.99.3)
blastp_kegg lcl|vvi:100258517 1 851 + 851 Gaps:32 100.00 819 79.12 0.0 ACAD10 acyl-CoA dehydrogenase family member 10
blastp_kegg lcl|rcu:RCOM_0682070 1 851 + 851 Gaps:29 100.00 822 77.98 0.0 protein with unknown function (EC:1.3.99.10)
blastp_kegg lcl|eus:EUTSA_v10020074mg 1 849 + 849 Gaps:30 99.64 824 76.86 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0010s01370g 1 851 + 851 Gaps:32 100.00 823 78.25 0.0 POPTRDRAFT_725647 acyl-CoA dehydrogenase-related family protein
blastp_pdb 2wbi_B 429 847 + 419 Gaps:33 92.99 428 54.77 1e-135 mol:protein length:428 ACYL-COA DEHYDROGENASE FAMILY MEMBER 11
blastp_pdb 2wbi_A 429 847 + 419 Gaps:33 92.99 428 54.77 1e-135 mol:protein length:428 ACYL-COA DEHYDROGENASE FAMILY MEMBER 11
blastp_pdb 3dxp_A 18 373 + 356 Gaps:24 93.59 359 44.64 8e-79 mol:protein length:359 putative acyl-CoA dehydrogenase
blastp_pdb 3mde_B 558 850 + 293 Gaps:5 74.81 385 29.51 1e-27 mol:protein length:385 MEDIUM CHAIN ACYL-COA DEHYDROGENASE
blastp_pdb 3mde_A 558 850 + 293 Gaps:5 74.81 385 29.51 1e-27 mol:protein length:385 MEDIUM CHAIN ACYL-COA DEHYDROGENASE
blastp_pdb 3mdd_B 558 850 + 293 Gaps:5 74.81 385 29.51 1e-27 mol:protein length:385 MEDIUM CHAIN ACYL-COA DEHYDROGENASE
blastp_pdb 3mdd_A 558 850 + 293 Gaps:5 74.81 385 29.51 1e-27 mol:protein length:385 MEDIUM CHAIN ACYL-COA DEHYDROGENASE
blastp_pdb 1udy_D 558 850 + 293 Gaps:5 72.73 396 29.51 1e-27 mol:protein length:396 Acyl-CoA dehydrogenase medium-chain specific
blastp_pdb 1udy_C 558 850 + 293 Gaps:5 72.73 396 29.51 1e-27 mol:protein length:396 Acyl-CoA dehydrogenase medium-chain specific
blastp_pdb 1udy_B 558 850 + 293 Gaps:5 72.73 396 29.51 1e-27 mol:protein length:396 Acyl-CoA dehydrogenase medium-chain specific
blastp_uniprot_sprot sp|Q8K370|ACD10_MOUSE 45 847 + 803 Gaps:54 71.75 1069 50.59 0.0 Acyl-CoA dehydrogenase family member 10 OS Mus musculus GN Acad10 PE 1 SV 1
blastp_uniprot_sprot sp|Q6JQN1|ACD10_HUMAN 45 847 + 803 Gaps:68 72.43 1059 52.15 0.0 Acyl-CoA dehydrogenase family member 10 OS Homo sapiens GN ACAD10 PE 2 SV 1
blastp_uniprot_sprot sp|Q5ZHT1|ACD11_CHICK 9 846 + 838 Gaps:94 97.81 777 49.47 0.0 Acyl-CoA dehydrogenase family member 11 OS Gallus gallus GN ACAD11 PE 2 SV 1
blastp_uniprot_sprot sp|Q80XL6|ACD11_MOUSE 1 847 + 847 Gaps:96 98.72 779 49.02 0.0 Acyl-CoA dehydrogenase family member 11 OS Mus musculus GN Acad11 PE 1 SV 2
blastp_uniprot_sprot sp|B3DMA2|ACD11_RAT 11 847 + 837 Gaps:94 97.43 779 49.28 0.0 Acyl-CoA dehydrogenase family member 11 OS Rattus norvegicus GN Acad11 PE 1 SV 1
blastp_uniprot_sprot sp|Q5R778|ACD11_PONAB 9 847 + 839 Gaps:92 97.44 781 49.54 0.0 Acyl-CoA dehydrogenase family member 11 OS Pongo abelii GN ACAD11 PE 2 SV 2
blastp_uniprot_sprot sp|Q709F0|ACD11_HUMAN 9 847 + 839 Gaps:93 97.44 780 49.61 0.0 Acyl-CoA dehydrogenase family member 11 OS Homo sapiens GN ACAD11 PE 1 SV 2
blastp_uniprot_sprot sp|Q9KJE8|BBSG_THAAR 467 850 + 384 Gaps:30 97.54 406 29.04 2e-28 (R)-benzylsuccinyl-CoA dehydrogenase OS Thauera aromatica GN bbsG PE 1 SV 1
blastp_uniprot_sprot sp|Q3SZB4|ACADM_BOVIN 549 848 + 300 Gaps:6 69.83 421 29.59 3e-28 Medium-chain specific acyl-CoA dehydrogenase mitochondrial OS Bos taurus GN ACADM PE 2 SV 1
blastp_uniprot_sprot sp|P45952|ACADM_MOUSE 549 848 + 300 Gaps:6 69.83 421 28.91 8e-28 Medium-chain specific acyl-CoA dehydrogenase mitochondrial OS Mus musculus GN Acadm PE 1 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 43 272 230 PF01636 none Phosphotransferase enzyme family IPR002575
PANTHER 518 850 333 PTHR10909:SF195 none none none
Pfam 582 636 55 PF02770 none Acyl-CoA dehydrogenase, middle domain IPR006091
PANTHER 518 850 333 PTHR10909 none none none
PANTHER 390 493 104 PTHR10909 none none none
SUPERFAMILY 693 848 156 SSF47203 none none IPR009075
Pfam 695 843 149 PF00441 none Acyl-CoA dehydrogenase, C-terminal domain IPR009075
PANTHER 390 493 104 PTHR10909:SF195 none none none
Pfam 435 578 144 PF02771 none Acyl-CoA dehydrogenase, N-terminal domain IPR013786
Gene3D 130 341 212 G3DSA:3.90.1200.10 none none none
SUPERFAMILY 34 346 313 SSF56112 none none IPR011009
Coils 758 779 22 Coil none none none
Gene3D 582 684 103 G3DSA:2.40.110.10 none none IPR006091
Gene3D 685 848 164 G3DSA:1.20.140.10 none none none
Gene3D 429 580 152 G3DSA:1.10.540.10 none none IPR013786
SUPERFAMILY 429 708 280 SSF56645 none none IPR009100

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting