Protein : Qrob_P0001880.2 Q. robur
Protein Identifier  ? Qrob_P0001880.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) PTHR14145:SF1 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 247  
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005985 sucrose metabolic process The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sot:102600142 183 246 + 64 none 16.58 386 84.38 2e-25 26S proteasome non-ATPase regulatory subunit 6 homolog
blastp_kegg lcl|sly:101267619 183 246 + 64 none 16.58 386 84.38 2e-25 probable 26S proteasome non-ATPase regulatory subunit 6-like
blastp_kegg lcl|gmx:100802610 183 246 + 64 none 16.67 384 84.38 3e-25 probable 26S proteasome non-ATPase regulatory subunit 6-like
blastp_kegg lcl|mus:103987610 186 246 + 61 none 14.22 429 86.89 3e-25 26S proteasome non-ATPase regulatory subunit 6-like
blastp_kegg lcl|vvi:100258219 186 246 + 61 none 15.80 386 86.89 3e-25 26S proteasome non-ATPase regulatory subunit 6-like
blastp_kegg lcl|rcu:RCOM_1507340 186 246 + 61 none 15.80 386 86.89 3e-25 26S proteasome non-atpase regulatory subunit putative
blastp_kegg lcl|pda:103697396 186 246 + 61 none 15.80 386 86.89 3e-25 26S proteasome non-ATPase regulatory subunit 6
blastp_kegg lcl|gmx:100789022 183 246 + 64 none 16.58 386 84.38 3e-25 probable 26S proteasome non-ATPase regulatory subunit 6-like
blastp_kegg lcl|tcc:TCM_014570 186 246 + 61 none 15.76 387 86.89 3e-25 26S proteasome regulatory subunit Rpn7 Proteasome component (PCI) domain isoform 1
blastp_kegg lcl|pvu:PHAVU_003G208200g 186 246 + 61 none 15.80 386 86.89 3e-25 hypothetical protein
blastp_pdb 3s29_H 4 67 + 64 Gaps:5 8.46 816 46.38 2e-11 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_G 4 67 + 64 Gaps:5 8.46 816 46.38 2e-11 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_F 4 67 + 64 Gaps:5 8.46 816 46.38 2e-11 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_E 4 67 + 64 Gaps:5 8.46 816 46.38 2e-11 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_D 4 67 + 64 Gaps:5 8.46 816 46.38 2e-11 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_C 4 67 + 64 Gaps:5 8.46 816 46.38 2e-11 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_B 4 67 + 64 Gaps:5 8.46 816 46.38 2e-11 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s29_A 4 67 + 64 Gaps:5 8.46 816 46.38 2e-11 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s28_H 4 67 + 64 Gaps:5 8.46 816 46.38 2e-11 mol:protein length:816 Sucrose synthase 1
blastp_pdb 3s28_G 4 67 + 64 Gaps:5 8.46 816 46.38 2e-11 mol:protein length:816 Sucrose synthase 1
blastp_uniprot_sprot sp|Q93Y35|PSMD6_ARATH 186 246 + 61 none 15.76 387 85.25 7e-26 26S proteasome non-ATPase regulatory subunit 6 homolog OS Arabidopsis thaliana GN RPN7 PE 1 SV 1
blastp_uniprot_sprot sp|Q8W425|PSMD6_ORYSJ 186 246 + 61 none 15.68 389 81.97 2e-24 26S proteasome non-ATPase regulatory subunit 6 OS Oryza sativa subsp. japonica GN RPN7 PE 2 SV 1
blastp_uniprot_sprot sp|Q99JI4|PSMD6_MOUSE 186 246 + 61 none 15.68 389 65.57 4e-18 26S proteasome non-ATPase regulatory subunit 6 OS Mus musculus GN Psmd6 PE 1 SV 1
blastp_uniprot_sprot sp|Q15008|PSMD6_HUMAN 186 246 + 61 none 15.68 389 65.57 5e-18 26S proteasome non-ATPase regulatory subunit 6 OS Homo sapiens GN PSMD6 PE 1 SV 1
blastp_uniprot_sprot sp|Q55C75|PSMD6_DICDI 171 246 + 76 Gaps:1 20.16 382 54.55 2e-17 26S proteasome non-ATPase regulatory subunit 6 OS Dictyostelium discoideum GN psmD6 PE 1 SV 1
blastp_uniprot_sprot sp|Q00917|SUS2_ARATH 4 70 + 67 Gaps:5 8.92 807 59.72 2e-17 Sucrose synthase 2 OS Arabidopsis thaliana GN SUS2 PE 2 SV 3
blastp_uniprot_sprot sp|O24301|SUS2_PEA 4 70 + 67 Gaps:5 8.90 809 58.33 2e-17 Sucrose synthase 2 OS Pisum sativum GN SUS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q3T0B2|PSMD6_BOVIN 186 246 + 61 none 15.68 389 65.57 3e-17 26S proteasome non-ATPase regulatory subunit 6 OS Bos taurus GN PSMD6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9V3G7|PSMD6_DROME 186 246 + 61 none 15.68 389 62.30 6e-17 26S proteasome non-ATPase regulatory subunit 6 OS Drosophila melanogaster GN Rpn7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M111|SUS3_ARATH 4 70 + 67 Gaps:5 8.90 809 55.56 2e-16 Sucrose synthase 3 OS Arabidopsis thaliana GN SUS3 PE 1 SV 1

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 183 246 64 PTHR14145:SF1 none none none
Pfam 4 48 45 PF00862 "KEGG:00500+2.4.1.13","MetaCyc:PWY-3801" Sucrose synthase IPR000368
PANTHER 183 246 64 PTHR14145 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 76   Mitochondrion 4 0.196 0.433 NON-PLANT 76