Protein : Qrob_P0001480.2 Q. robur
Protein Identifier  ? Qrob_P0001480.2 Organism . Name  Quercus robur
Score  95.1 Score Type  egn
Protein Description  (M=1) K16329 - pseudouridine-5'-phosphate glycosidase [EC:3.2.-.-] Code Enzyme  EC:4.2.1.70
Gene Prediction Quality  validated Protein length 

Sequence

Length: 353  
Kegg Orthology  K16329
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016798 hydrolase activity, acting on glycosyl bonds Catalysis of the hydrolysis of any glycosyl bond.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100247897 1 342 + 342 Gaps:12 98.27 346 79.71 0.0 pseudouridine-5'-phosphate glycosidase-like
blastp_kegg lcl|pxb:103930867 8 342 + 335 Gaps:17 94.52 347 79.27 1e-180 pseudouridine-metabolizing bifunctional protein C1861.05-like
blastp_kegg lcl|pxb:103946974 8 342 + 335 Gaps:17 94.52 347 80.18 1e-180 pseudouridine-metabolizing bifunctional protein C1861.05-like
blastp_kegg lcl|pmum:103326776 11 342 + 332 Gaps:17 94.75 343 81.23 1e-180 pseudouridine-metabolizing bifunctional protein C1861.05
blastp_kegg lcl|tcc:TCM_040834 6 335 + 330 Gaps:21 95.51 334 81.82 3e-179 Indigoidine synthase A family protein isoform 1
blastp_kegg lcl|cit:102608204 11 337 + 327 Gaps:19 93.81 339 80.19 6e-178 pseudouridine-metabolizing bifunctional protein C1861.05-like
blastp_kegg lcl|gmx:100795266 1 341 + 341 Gaps:13 99.71 339 77.22 3e-177 pseudouridine-metabolizing bifunctional protein C1861.05-like
blastp_kegg lcl|pop:POPTR_0001s26090g 13 342 + 330 Gaps:13 95.14 350 77.48 5e-177 POPTRDRAFT_1067864 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_891984 2 335 + 334 Gaps:17 99.09 330 77.37 7e-175 indigoidine synthase A family protein
blastp_kegg lcl|cmo:103492003 11 336 + 326 Gaps:13 95.64 344 77.81 1e-174 pseudouridine-metabolizing bifunctional protein C1861.05
blastp_pdb 1vkm_F 46 334 + 289 Gaps:21 93.60 297 39.93 3e-47 mol:protein length:297 conserved hypothetical protein TM1464
blastp_pdb 1vkm_E 46 334 + 289 Gaps:21 93.60 297 39.93 3e-47 mol:protein length:297 conserved hypothetical protein TM1464
blastp_pdb 1vkm_D 46 334 + 289 Gaps:21 93.60 297 39.93 3e-47 mol:protein length:297 conserved hypothetical protein TM1464
blastp_pdb 1vkm_C 46 334 + 289 Gaps:21 93.60 297 39.93 3e-47 mol:protein length:297 conserved hypothetical protein TM1464
blastp_pdb 1vkm_B 46 334 + 289 Gaps:21 93.60 297 39.93 3e-47 mol:protein length:297 conserved hypothetical protein TM1464
blastp_pdb 1vkm_A 46 334 + 289 Gaps:21 93.60 297 39.93 3e-47 mol:protein length:297 conserved hypothetical protein TM1464
blastp_uniprot_sprot sp|C0ZIY1|PSUG_BREBN 36 342 + 307 Gaps:14 98.38 308 55.45 6e-101 Pseudouridine-5'-phosphate glycosidase OS Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN psuG PE 3 SV 1
blastp_uniprot_sprot sp|Q8NYD0|PSUG_STAAW 36 335 + 300 Gaps:11 97.39 307 55.18 1e-100 Pseudouridine-5'-phosphate glycosidase OS Staphylococcus aureus (strain MW2) GN psuG PE 3 SV 1
blastp_uniprot_sprot sp|B1HV79|PSUG_LYSSC 34 336 + 303 Gaps:11 99.34 304 53.97 3e-98 Pseudouridine-5'-phosphate glycosidase OS Lysinibacillus sphaericus (strain C3-41) GN psuG PE 3 SV 1
blastp_uniprot_sprot sp|Q1M4T3|PSUG2_RHIL3 37 340 + 304 Gaps:11 98.06 309 53.47 7e-96 Pseudouridine-5'-phosphate glycosidase 2 OS Rhizobium leguminosarum bv. viciae (strain 3841) GN psuG2 PE 3 SV 1
blastp_uniprot_sprot sp|A7GCK7|PSUG_CLOBL 36 337 + 302 Gaps:10 98.37 307 53.31 1e-95 Pseudouridine-5'-phosphate glycosidase OS Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN psuG PE 3 SV 1
blastp_uniprot_sprot sp|A9BJN0|PSUG_PETMO 36 329 + 294 Gaps:11 95.75 306 53.24 4e-94 Pseudouridine-5'-phosphate glycosidase OS Petrotoga mobilis (strain DSM 10674 / SJ95) GN psuG PE 3 SV 1
blastp_uniprot_sprot sp|C0QZV6|PSUG_BRAHW 34 337 + 304 Gaps:11 98.38 308 51.82 4e-93 Pseudouridine-5'-phosphate glycosidase OS Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN psuG PE 3 SV 1
blastp_uniprot_sprot sp|Q8RCT3|PSUG_THETN 35 339 + 305 Gaps:11 99.02 307 55.26 1e-92 Pseudouridine-5'-phosphate glycosidase OS Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN psuG PE 3 SV 1
blastp_uniprot_sprot sp|B6IRJ4|PSUG_RHOCS 34 337 + 304 Gaps:12 94.38 320 56.29 2e-92 Pseudouridine-5'-phosphate glycosidase OS Rhodospirillum centenum (strain ATCC 51521 / SW) GN psuG PE 3 SV 1
blastp_uniprot_sprot sp|Q7MZE1|PSUG2_PHOLL 36 329 + 294 Gaps:10 94.23 312 52.04 5e-92 Pseudouridine-5'-phosphate glycosidase 2 OS Photorhabdus luminescens subsp. laumondii (strain TT01) GN psuG2 PE 3 SV 1
rpsblast_cdd gnl|CDD|190914 40 332 + 293 Gaps:10 100.00 293 63.14 1e-136 pfam04227 Indigoidine_A Indigoidine synthase A like protein. Indigoidine is a blue pigment synthesised by Erwinia chrysanthemi implicated in pathogenicity and protection from oxidative stress. IdgA is involved in indigoidine biosynthesis but its specific function is unknown. The recommended name for this protein is now pseudouridine-5'-phosphate glycosidase.
rpsblast_cdd gnl|CDD|32467 34 335 + 302 Gaps:11 97.10 310 59.14 2e-95 COG2313 IndA Uncharacterized enzyme involved in pigment biosynthesis [Secondary metabolites biosynthesis transport and catabolism].
rpsblast_kog gnl|CDD|38219 5 336 + 332 Gaps:19 53.26 614 56.57 1e-100 KOG3009 KOG3009 KOG3009 Predicted carbohydrate kinase contains PfkB domain [General function prediction only].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 7 95 89 PTHR10584:SF1 "KEGG:00240+4.2.1.70","MetaCyc:PWY-6019";signature_desc=UNCHARACTERIZED none IPR007342
PANTHER 111 271 161 PTHR10584 none none none
SUPERFAMILY 34 332 299 SSF110581 none none none
PANTHER 7 95 89 PTHR10584 none none none
Pfam 40 332 293 PF04227 "KEGG:00240+4.2.1.70","MetaCyc:PWY-6019" Indigoidine synthase A like protein IPR007342
PANTHER 111 271 161 PTHR10584:SF1 "KEGG:00240+4.2.1.70","MetaCyc:PWY-6019";signature_desc=UNCHARACTERIZED none IPR007342

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting