Protein : Qrob_P0001460.2 Q. robur
Protein Identifier  ? Qrob_P0001460.2 Organism . Name  Quercus robur
Score  92.1 Score Type  egn
Protein Description  (M=1) 1.3.7.4 - Phytochromobilin:ferredoxin oxidoreductase. Code Enzyme  EC:1.3.7.4
Gene Prediction Quality  validated Protein length 

Sequence

Length: 382  
Kegg Orthology  K08101
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0010024 phytochromobilin biosynthetic process The chemical reactions and pathways resulting in the formation of phytochromobilin, which involves the oxidative cleavage of heme by a heme oxygenase(HO) to form biliverdin IX alpha.
GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.
GO:0050897 cobalt ion binding Interacting selectively and non-covalently with a cobalt (Co) ion.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102609362 11 377 + 367 Gaps:56 97.60 333 72.00 5e-160 phytochromobilin:ferredoxin oxidoreductase chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10015899mg 11 379 + 369 Gaps:56 99.39 329 70.95 3e-157 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa008498mg 1 376 + 376 Gaps:55 98.18 329 71.83 9e-156 hypothetical protein
blastp_kegg lcl|pmum:103326785 7 376 + 370 Gaps:52 97.26 329 71.25 2e-154 phytochromobilin:ferredoxin oxidoreductase chloroplastic
blastp_kegg lcl|vvi:100267105 41 379 + 339 Gaps:50 88.79 330 75.09 6e-151 phytochromobilin:ferredoxin oxidoreductase chloroplastic-like
blastp_kegg lcl|pxb:103929552 6 379 + 374 Gaps:51 98.50 334 68.69 7e-151 phytochromobilin:ferredoxin oxidoreductase chloroplastic-like
blastp_kegg lcl|pxb:103934579 6 377 + 372 Gaps:56 97.90 333 69.63 3e-148 phytochromobilin:ferredoxin oxidoreductase chloroplastic-like
blastp_kegg lcl|tcc:TCM_040841 18 377 + 360 Gaps:57 93.11 334 69.77 1e-147 Phytochromobilin:ferredoxin oxidoreductas isoform 3
blastp_kegg lcl|pop:POPTR_0001s26050g 19 377 + 359 Gaps:52 93.20 338 67.30 2e-143 POPTRDRAFT_172219 hypothetical protein
blastp_kegg lcl|cmo:103492001 39 377 + 339 Gaps:49 90.68 322 70.89 1e-142 phytochromobilin:ferredoxin oxidoreductase chloroplastic
blastp_pdb 2x9o_A 118 328 + 211 Gaps:34 78.28 244 27.75 3e-07 mol:protein length:244 15 16- DIHYDROBILIVERDIN-FERREDOXIN OXIDOREDU
blastp_uniprot_sprot sp|Q9SR43|PFBS_ARATH 18 377 + 360 Gaps:52 94.22 329 57.74 3e-117 Phytochromobilin:ferredoxin oxidoreductase chloroplastic OS Arabidopsis thaliana GN HY2 PE 2 SV 1
blastp_uniprot_sprot sp|Q93TM8|PEBB_NOSP7 52 329 + 278 Gaps:58 92.55 255 33.47 1e-28 Phycoerythrobilin:ferredoxin oxidoreductase OS Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN pebB PE 3 SV 1
blastp_uniprot_sprot sp|Q10UW6|PEBB_TRIEI 52 329 + 278 Gaps:58 92.19 256 34.32 5e-28 Phycoerythrobilin:ferredoxin oxidoreductase OS Trichodesmium erythraeum (strain IMS101) GN pebB PE 3 SV 1
blastp_uniprot_sprot sp|Q7NL65|PEBB_GLOVI 122 329 + 208 Gaps:30 76.73 245 34.04 5e-24 Phycoerythrobilin:ferredoxin oxidoreductase OS Gloeobacter violaceus (strain PCC 7421) GN pebB PE 3 SV 1
blastp_uniprot_sprot sp|Q7U4P6|PEBB_SYNPX 127 329 + 203 Gaps:33 70.99 262 32.80 2e-17 Phycoerythrobilin:ferredoxin oxidoreductase OS Synechococcus sp. (strain WH8102) GN pebB PE 3 SV 1
blastp_uniprot_sprot sp|Q7V585|PEBB_PROMM 127 329 + 203 Gaps:29 72.37 257 32.26 6e-16 Phycoerythrobilin:ferredoxin oxidoreductase OS Prochlorococcus marinus (strain MIT 9313) GN pebB PE 3 SV 1
blastp_uniprot_sprot sp|Q3AUU4|PEBB_SYNS9 127 329 + 203 Gaps:35 72.37 257 33.33 7e-16 Phycoerythrobilin:ferredoxin oxidoreductase OS Synechococcus sp. (strain CC9902) GN pebB PE 3 SV 1
blastp_uniprot_sprot sp|Q02190|PEBB_SYNPY 127 329 + 203 Gaps:31 72.37 257 31.18 2e-15 Phycoerythrobilin:ferredoxin oxidoreductase OS Synechococcus sp. (strain WH8020) GN pebB PE 3 SV 2
blastp_uniprot_sprot sp|A2CBW9|PEBB_PROM3 127 329 + 203 Gaps:29 72.37 257 31.18 2e-15 Phycoerythrobilin:ferredoxin oxidoreductase OS Prochlorococcus marinus (strain MIT 9303) GN pebB PE 3 SV 1
blastp_uniprot_sprot sp|A2C538|PEBB_PROM1 76 329 + 254 Gaps:38 90.70 258 27.35 3e-15 Phycoerythrobilin:ferredoxin oxidoreductase OS Prochlorococcus marinus (strain NATL1A) GN pebB PE 3 SV 1
rpsblast_cdd gnl|CDD|203369 62 329 + 268 Gaps:56 98.25 228 33.48 1e-48 pfam05996 Fe_bilin_red Ferredoxin-dependent bilin reductase. This family consists of several different but closely related proteins which include phycocyanobilin:ferredoxin oxidoreductase EC:1.3.7.5 (PcyA) 15 16-dihydrobiliverdin:ferredoxin oxidoreductase EC:1.3.7.2 (PebA) and phycoerythrobilin:ferredoxin oxidoreductase EC:1.3.7.3 (PebB). Phytobilins are linear tetrapyrrole precursors of the light-harvesting prosthetic groups of the phytochrome photoreceptors of plants and the phycobiliprotein photosynthetic antennae of cyanobacteria red algae and cryptomonads. It is known that that phytobilins are synthesised from heme via the intermediary of biliverdin IX alpha (BV) which is reduced subsequently by ferredoxin-dependent bilin reductases with different double-bond specificities.
rpsblast_cdd gnl|CDD|139427 52 329 + 278 Gaps:48 95.16 248 33.90 2e-28 PRK13250 PRK13250 phycoerythrobilin:ferredoxin oxidoreductase Provisional.
rpsblast_cdd gnl|CDD|139426 127 329 + 203 Gaps:35 72.37 257 34.95 4e-17 PRK13249 PRK13249 phycoerythrobilin:ferredoxin oxidoreductase Provisional.
rpsblast_cdd gnl|CDD|139424 110 328 + 219 Gaps:34 83.61 238 28.14 9e-12 PRK13247 PRK13247 dihydrobiliverdin:ferredoxin oxidoreductase Provisional.
rpsblast_cdd gnl|CDD|139425 127 328 + 202 Gaps:32 72.73 253 28.26 2e-09 PRK13248 PRK13248 phycoerythrobilin:ferredoxin oxidoreductase Provisional.

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 96 284 189 PF05996 none Ferredoxin-dependent bilin reductase IPR009249

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting