Protein : Qrob_P0001420.2 Q. robur
Protein Identifier  ? Qrob_P0001420.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=42) PF12937 - F-box-like Gene Prediction Quality  validated
Protein length 

Sequence

Length: 356  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_040847 4 355 + 352 Gaps:23 96.89 354 52.77 6e-102 F-box family protein putative
blastp_kegg lcl|pop:POPTR_0009s05230g 1 355 + 355 Gaps:28 93.91 361 47.79 1e-90 POPTRDRAFT_650118 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0063160 4 355 + 352 Gaps:22 96.63 356 48.26 5e-84 hypothetical protein
blastp_kegg lcl|vvi:100260225 4 355 + 352 Gaps:24 97.66 342 49.40 1e-83 F-box protein At4g18380-like
blastp_kegg lcl|csv:101225666 4 355 + 352 Gaps:17 97.46 354 44.64 3e-82 F-box protein At4g18380-like
blastp_kegg lcl|csv:101218130 4 355 + 352 Gaps:17 97.46 354 44.35 8e-82 F-box protein At4g18380-like
blastp_kegg lcl|cmo:103491999 4 355 + 352 Gaps:17 93.75 368 44.93 1e-77 F-box protein At4g18380-like
blastp_kegg lcl|vvi:100256828 4 355 + 352 Gaps:23 97.65 341 44.74 4e-76 F-box protein At4g18380-like
blastp_kegg lcl|cic:CICLE_v10015553mg 4 355 + 352 Gaps:40 85.35 389 45.48 1e-70 hypothetical protein
blastp_kegg lcl|cit:102609828 4 355 + 352 Gaps:39 96.52 345 45.05 4e-70 F-box protein At4g18380-like
blastp_uniprot_sprot sp|O49508|FB237_ARATH 2 355 + 354 Gaps:52 94.74 380 36.94 2e-54 F-box protein At4g18380 OS Arabidopsis thaliana GN At4g18380 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FNK5|FB285_ARATH 1 298 + 298 Gaps:51 84.30 395 34.53 7e-48 F-box protein At5g46170 OS Arabidopsis thaliana GN At5g46170 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C534|FB19_ARATH 4 355 + 352 Gaps:56 93.93 379 35.96 1e-42 F-box protein At1g30200 OS Arabidopsis thaliana GN At1g30200 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C9S2|FB91_ARATH 3 355 + 353 Gaps:39 100.00 334 32.93 2e-39 F-box protein At1g78100 OS Arabidopsis thaliana GN At1g78100 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LM18|FB303_ARATH 3 355 + 353 Gaps:45 100.00 314 36.31 3e-39 F-box protein At1g22220 OS Arabidopsis thaliana GN At1g22220 PE 2 SV 1

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 7 42 36 PF12937 none F-box-like IPR001810
SUPERFAMILY 1 53 53 SSF81383 none none IPR001810
Gene3D 2 65 64 G3DSA:1.20.1280.50 none none none
PANTHER 1 355 355 PTHR31215 none none none

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 38   Secretory pathway 4 0.720 0.050 NON-PLANT 38