4 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0005506 | iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. |
GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. |
GO:0020037 | heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
GO:0055114 | oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
45 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|rcu:RCOM_0833060 | 36 | 541 | + | 506 | Gaps:36 | 94.62 | 520 | 67.28 | 0.0 | cytochrome P450 putative (EC:1.14.14.1) |
blastp_kegg | lcl|cic:CICLE_v10014886mg | 1 | 541 | + | 541 | Gaps:28 | 100.00 | 527 | 63.19 | 0.0 | hypothetical protein |
blastp_kegg | lcl|cit:102611940 | 1 | 541 | + | 541 | Gaps:28 | 99.62 | 529 | 63.19 | 0.0 | cytochrome P450 94A1-like |
blastp_kegg | lcl|pda:103724058 | 14 | 541 | + | 528 | Gaps:27 | 98.49 | 529 | 54.13 | 0.0 | cytochrome P450 94A1-like |
blastp_kegg | lcl|pmum:103326726 | 49 | 541 | + | 493 | Gaps:62 | 82.36 | 533 | 64.01 | 0.0 | cytochrome P450 94A1-like |
blastp_kegg | lcl|mus:103995931 | 14 | 541 | + | 528 | Gaps:34 | 99.24 | 528 | 52.10 | 0.0 | cytochrome P450 94A2-like |
blastp_kegg | lcl|dosa:Os01t0951500-01 | 46 | 540 | + | 495 | Gaps:23 | 91.21 | 546 | 49.40 | 3e-173 | Os01g0951500 Cytochrome P450 family protein. |
blastp_kegg | lcl|osa:9266794 | 46 | 540 | + | 495 | Gaps:23 | 91.21 | 546 | 49.40 | 3e-173 | Os01g0951500 |
blastp_kegg | lcl|sita:101780311 | 46 | 540 | + | 495 | Gaps:23 | 91.93 | 533 | 50.82 | 1e-172 | cytochrome P450 94A2-like |
blastp_kegg | lcl|zma:103650734 | 46 | 540 | + | 495 | Gaps:23 | 93.63 | 534 | 50.20 | 7e-170 | cytochrome P450 94A1-like |
blastp_pdb | 3mdv_B | 66 | 530 | + | 465 | Gaps:66 | 93.64 | 456 | 27.63 | 5e-22 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdv_A | 66 | 530 | + | 465 | Gaps:66 | 93.64 | 456 | 27.63 | 5e-22 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdt_B | 66 | 530 | + | 465 | Gaps:66 | 93.64 | 456 | 27.63 | 5e-22 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdt_A | 66 | 530 | + | 465 | Gaps:66 | 93.64 | 456 | 27.63 | 5e-22 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdr_B | 66 | 530 | + | 465 | Gaps:66 | 93.64 | 456 | 27.63 | 5e-22 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdr_A | 66 | 530 | + | 465 | Gaps:66 | 93.64 | 456 | 27.63 | 5e-22 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdm_A | 66 | 530 | + | 465 | Gaps:66 | 93.64 | 456 | 27.63 | 5e-22 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 2q9g_A | 66 | 530 | + | 465 | Gaps:66 | 93.64 | 456 | 27.63 | 5e-22 | mol:protein length:456 Cytochrome P450 46A1 |
blastp_pdb | 2q9f_A | 66 | 530 | + | 465 | Gaps:66 | 93.64 | 456 | 27.63 | 5e-22 | mol:protein length:456 Cytochrome P450 46A1 |
blastp_pdb | 1zoa_B | 117 | 502 | + | 386 | Gaps:53 | 74.63 | 473 | 27.48 | 3e-20 | mol:protein length:473 Bifunctional P-450:NADPH-P450 reductase |
blastp_uniprot_sprot | sp|O81117|C94A1_VICSA | 36 | 539 | + | 504 | Gaps:52 | 92.61 | 514 | 47.06 | 5e-144 | Cytochrome P450 94A1 OS Vicia sativa GN CYP94A1 PE 2 SV 2 |
blastp_uniprot_sprot | sp|P98188|C94A2_VICSA | 21 | 539 | + | 519 | Gaps:48 | 97.27 | 513 | 46.09 | 9e-138 | Cytochrome P450 94A2 OS Vicia sativa GN CYP94A2 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9CAD6|C86A7_ARATH | 17 | 539 | + | 523 | Gaps:45 | 96.37 | 523 | 41.87 | 7e-119 | Cytochrome P450 86A7 OS Arabidopsis thaliana GN CYP86A7 PE 2 SV 1 |
blastp_uniprot_sprot | sp|O23066|C86A2_ARATH | 47 | 539 | + | 493 | Gaps:35 | 87.16 | 553 | 41.29 | 1e-117 | Cytochrome P450 86A2 OS Arabidopsis thaliana GN CYP86A2 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9LMM1|C86A4_ARATH | 47 | 539 | + | 493 | Gaps:39 | 87.36 | 554 | 41.53 | 3e-117 | Cytochrome P450 86A4 OS Arabidopsis thaliana GN CYP86A4 PE 2 SV 1 |
blastp_uniprot_sprot | sp|O80823|C86A8_ARATH | 47 | 539 | + | 493 | Gaps:38 | 89.57 | 537 | 42.20 | 3e-114 | Cytochrome P450 86A8 OS Arabidopsis thaliana GN CYP86A8 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9FMY1|C86B1_ARATH | 25 | 539 | + | 515 | Gaps:39 | 89.80 | 559 | 39.64 | 2e-110 | Cytochrome P450 86B1 OS Arabidopsis thaliana GN CYP86B1 PE 2 SV 1 |
blastp_uniprot_sprot | sp|P48422|C86A1_ARATH | 19 | 541 | + | 523 | Gaps:56 | 97.66 | 513 | 40.32 | 1e-108 | Cytochrome P450 86A1 OS Arabidopsis thaliana GN CYP86A1 PE 1 SV 2 |
blastp_uniprot_sprot | sp|Q50EK3|C04C1_PINTA | 51 | 539 | + | 489 | Gaps:38 | 92.08 | 518 | 38.16 | 3e-100 | Cytochrome P450 704C1 OS Pinus taeda GN CYP704C1 PE 2 SV 1 |
blastp_uniprot_sprot | sp|P85191|CP450_HELAN | 383 | 539 | + | 157 | Gaps:8 | 96.13 | 155 | 49.66 | 1e-42 | Cytochrome P450 (Fragment) OS Helianthus annuus PE 1 SV 1 |
20 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Phobius | 12 | 35 | 24 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
Phobius | 1 | 11 | 11 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
PANTHER | 1 | 541 | 541 | PTHR24296 | none | none | none |
PANTHER | 1 | 541 | 541 | PTHR24296:SF0 | none | none | none |
Gene3D | 37 | 540 | 504 | G3DSA:1.10.630.10 | "Reactome:REACT_13433" | none | IPR001128 |
Phobius | 350 | 541 | 192 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
Phobius | 326 | 349 | 24 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
SUPERFAMILY | 45 | 539 | 495 | SSF48264 | "Reactome:REACT_13433" | none | IPR001128 |
PRINTS | 333 | 350 | 18 | PR00385 | "Reactome:REACT_13433" | P450 superfamily signature | IPR001128 |
PRINTS | 392 | 403 | 12 | PR00385 | "Reactome:REACT_13433" | P450 superfamily signature | IPR001128 |
PRINTS | 471 | 480 | 10 | PR00385 | "Reactome:REACT_13433" | P450 superfamily signature | IPR001128 |
PRINTS | 480 | 491 | 12 | PR00385 | "Reactome:REACT_13433" | P450 superfamily signature | IPR001128 |
PRINTS | 391 | 409 | 19 | PR00463 | none | E-class P450 group I signature | IPR002401 |
PRINTS | 342 | 368 | 27 | PR00463 | none | E-class P450 group I signature | IPR002401 |
PRINTS | 480 | 503 | 24 | PR00463 | none | E-class P450 group I signature | IPR002401 |
PRINTS | 470 | 480 | 11 | PR00463 | none | E-class P450 group I signature | IPR002401 |
PRINTS | 322 | 339 | 18 | PR00463 | none | E-class P450 group I signature | IPR002401 |
Pfam | 45 | 521 | 477 | PF00067 | "Reactome:REACT_13433" | Cytochrome P450 | IPR001128 |
Phobius | 36 | 325 | 290 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
ProSitePatterns | 473 | 482 | 10 | PS00086 | "Reactome:REACT_13433" | Cytochrome P450 cysteine heme-iron ligand signature. | IPR017972 |
8 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran1_2004_QTL1_peak_Bud_burst_A4 | Qrob_Chr01 | 1 | s_1AMVCC_444 | s_1BE1VC_321 | 4 | 0 | 31 | lod | 3,2 | 7,4 |
Bourran2_2003_QTL8_peak_Bud_burst_A4 | Qrob_Chr01 | 1 | s_1AH7I_610 | s_1BE1VC_321 | 4,6 | 0 | 28 | lod | 3,5 | 7,4 |
Bourran2_2007_QTL6_peak_Bud_burst_3P | Qrob_Chr01 | 1 | s_1BE1VC_321 | s_1A5JRZ_890 | 5 | 0 | 25 | lod | 2,4 | 6 |
Bourran2_2014_nEpiBC_3P | Qrob_Chr01 | 1 | v_1588_550 | s_1AZJRA_1600 | 30,48 | 9,48 | 43,98 | lod | 2,3642 | 6,3 |
Bourran2_2014_nLBD*_A4 | Qrob_Chr08 | 8 | v_12498_318 | v_12364_308 | 34,91 | 16,12 | 53,62 | lod | 2,4961 | 5,2 |
Bourran2_2014_nSecLBD_3P | Qrob_Chr08 | 8 | s_1BN2OD_551 | s_1B5AYF_599 | 17,17 | 0 | 43,51 | lod | 1,9229 | 4,4 |
Bourran2_2014_rEpiBC*_A4 | Qrob_Chr08 | 8 | v_12498_318 | v_12364_308 | 35,77 | 14,11 | 55,31 | lod | 2,9413 | 6,2 |
Bourran2_2015_nEpiBC_3P | Qrob_Chr12 | 12 | s_1B73S5_217 | v_7050_211 | 28,31 | 26,37 | 28,45 | lod | 4.5 | 11.6 |