Protein : Qrob_P0000950.2 Q. robur
Protein Identifier  ? Qrob_P0000950.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR23177:SF8 - CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED (PTHR23177:SF8) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 166  
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0 Synonyms

0 GO Terms

18 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100259906 1 150 + 150 Gaps:2 100.00 148 69.59 2e-68 uncharacterized LOC100259906
blastp_kegg lcl|mdm:103451150 1 165 + 165 Gaps:17 98.38 185 63.19 6e-66 CRIB domain-containing protein RIC4
blastp_kegg lcl|pxb:103930398 1 165 + 165 Gaps:18 92.89 197 61.20 7e-64 CRIB domain-containing protein RIC4
blastp_kegg lcl|mdm:103419530 1 165 + 165 Gaps:18 93.37 196 60.11 5e-63 CRIB domain-containing protein RIC4-like
blastp_kegg lcl|mdm:103408691 1 165 + 165 Gaps:18 93.37 196 60.11 5e-63 CRIB domain-containing protein RIC4-like
blastp_kegg lcl|pop:POPTR_0013s08440g 1 165 + 165 Gaps:1 98.22 169 65.66 4e-62 hypothetical protein
blastp_kegg lcl|mdm:103434269 1 165 + 165 Gaps:18 93.37 196 59.56 5e-62 CRIB domain-containing protein RIC4-like
blastp_kegg lcl|pmum:103318788 1 165 + 165 Gaps:14 98.35 182 65.92 3e-58 CRIB domain-containing protein RIC4
blastp_kegg lcl|pper:PRUPE_ppa014687mg 1 165 + 165 Gaps:14 98.35 182 65.92 2e-57 hypothetical protein
blastp_kegg lcl|tcc:TCM_025255 1 165 + 165 Gaps:8 98.82 169 61.08 3e-57 ROP-interactive CRIB motif-containing protein 4 putative isoform 1
blastp_uniprot_sprot sp|Q9FFD5|RIC4_ARATH 1 141 + 141 Gaps:16 89.54 153 52.55 1e-35 CRIB domain-containing protein RIC4 OS Arabidopsis thaliana GN RIC4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M0Y9|RIC10_ARATH 79 131 + 53 Gaps:6 30.13 156 57.45 3e-10 CRIB domain-containing protein RIC10 OS Arabidopsis thaliana GN RIC10 PE 2 SV 1
blastp_uniprot_sprot sp|Q1G3K8|RIC7_ARATH 73 141 + 69 Gaps:11 26.85 216 50.00 5e-09 CRIB domain-containing protein RIC7 OS Arabidopsis thaliana GN RIC7 PE 1 SV 1
blastp_uniprot_sprot sp|Q8GYU0|RIC2_ARATH 70 124 + 55 Gaps:1 50.45 111 48.21 1e-07 CRIB domain-containing protein RIC2 OS Arabidopsis thaliana GN RIC2 PE 1 SV 1
blastp_uniprot_sprot sp|F4J424|RIC5_ARATH 72 127 + 56 Gaps:5 26.42 193 45.10 2e-07 CRIB domain-containing protein RIC5 OS Arabidopsis thaliana GN RIC5 PE 1 SV 1
blastp_uniprot_sprot sp|Q1PF35|RIC6_ARATH 79 131 + 53 Gaps:5 22.64 212 47.92 1e-06 CRIB domain-containing protein RIC6 OS Arabidopsis thaliana GN RIC6 PE 1 SV 1
blastp_uniprot_sprot sp|F4I5N6|RIC3_ARATH 79 124 + 46 Gaps:5 18.64 220 56.10 2e-06 CRIB domain-containing protein RIC3 OS Arabidopsis thaliana GN RIC3 PE 1 SV 1
blastp_uniprot_sprot sp|F4IVV0|RIC1_ARATH 72 127 + 56 Gaps:5 22.77 224 45.10 7e-06 CRIB domain-containing protein RIC1 OS Arabidopsis thaliana GN RIC1 PE 1 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 19 26 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
ProSiteProfiles 105 118 14 PS50108 none CRIB domain profile. IPR000095
Phobius 27 165 139 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 26 26 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 4 120 117 PTHR23177:SF8 none none none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 102 124 23 G3DSA:3.90.810.10 none none IPR000095
Pfam 104 123 20 PF00786 none P21-Rho-binding domain IPR000095
PANTHER 4 120 117 PTHR23177 none none none
Phobius 8 18 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 34   Mitochondrion 5 0.214 0.326 NON-PLANT 34