Protein : Qrob_P0000440.2 Q. robur
Protein Identifier  ? Qrob_P0000440.2 Organism . Name  Quercus robur
Score  72.0 Score Type  egn
Protein Description  (M=1) KOG1814//KOG1815 - Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones]. // Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones]. Code Enzyme  EC:6.3.2.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 187  
Kegg Orthology  K11968
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_025075 2 167 + 166 none 27.85 596 86.75 4e-100 IBR domain-containing protein isoform 1
blastp_kegg lcl|pmum:103318823 2 167 + 166 none 27.90 595 84.94 2e-97 probable E3 ubiquitin-protein ligase ARI8
blastp_kegg lcl|pper:PRUPE_ppa003187mg 2 167 + 166 none 27.90 595 84.94 2e-96 hypothetical protein
blastp_kegg lcl|pop:POPTR_0010s18800g 2 167 + 166 none 28.09 591 82.53 3e-96 POPTRDRAFT_822354 zinc finger family protein
blastp_kegg lcl|vvi:100257000 2 167 + 166 none 25.46 652 83.73 1e-95 probable E3 ubiquitin-protein ligase ARI8-like
blastp_kegg lcl|pop:POPTR_0008s07680g 2 167 + 166 none 28.09 591 82.53 7e-95 POPTRDRAFT_820446 zinc finger family protein
blastp_kegg lcl|cit:102630454 2 167 + 166 Gaps:1 28.07 595 80.84 2e-93 probable E3 ubiquitin-protein ligase ARI8-like
blastp_kegg lcl|csv:101224197 2 167 + 166 none 50.76 327 78.31 7e-93 probable E3 ubiquitin-protein ligase ARI8-like
blastp_kegg lcl|pxb:103951834 2 167 + 166 none 28.14 590 82.53 3e-92 probable E3 ubiquitin-protein ligase ARI8
blastp_kegg lcl|cic:CICLE_v10012327mg 14 167 + 154 none 53.85 286 83.12 3e-92 hypothetical protein
blastp_uniprot_sprot sp|Q8W468|ARI8_ARATH 2 167 + 166 none 29.28 567 72.89 9e-85 Probable E3 ubiquitin-protein ligase ARI8 OS Arabidopsis thaliana GN ARI8 PE 2 SV 1
blastp_uniprot_sprot sp|Q84RR0|ARI7_ARATH 2 167 + 166 none 29.54 562 65.06 3e-76 Probable E3 ubiquitin-protein ligase ARI7 OS Arabidopsis thaliana GN ARI7 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L829|ARI5_ARATH 4 167 + 164 none 29.71 552 64.63 4e-74 Probable E3 ubiquitin-protein ligase ARI5 OS Arabidopsis thaliana GN ARI5 PE 2 SV 1
blastp_uniprot_sprot sp|P0C8K8|ARI6_ARATH 4 167 + 164 Gaps:3 29.17 552 62.11 3e-69 Putative E3 ubiquitin-protein ligase ARI6 OS Arabidopsis thaliana GN ARI6 PE 5 SV 1
blastp_uniprot_sprot sp|Q9SKC3|ARI9_ARATH 2 167 + 166 Gaps:8 32.04 543 51.72 5e-60 Probable E3 ubiquitin-protein ligase ARI9 OS Arabidopsis thaliana GN ARI9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKC4|ARI10_ARATH 3 167 + 165 Gaps:1 32.30 514 51.81 1e-59 Probable E3 ubiquitin-protein ligase ARI10 OS Arabidopsis thaliana GN ARI10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKC2|ARI11_ARATH 2 167 + 166 Gaps:1 30.81 542 51.50 1e-59 Probable E3 ubiquitin-protein ligase ARI11 OS Arabidopsis thaliana GN ARI11 PE 2 SV 1
blastp_uniprot_sprot sp|Q84RQ9|ARI12_ARATH 6 167 + 162 Gaps:13 33.67 496 38.32 5e-28 Probable E3 ubiquitin-protein ligase ARI12 OS Arabidopsis thaliana GN ARI12 PE 2 SV 2
blastp_uniprot_sprot sp|Q6T486|RBRA_DICDI 2 165 + 164 Gaps:8 32.31 520 30.36 6e-23 Probable E3 ubiquitin-protein ligase rbrA OS Dictyostelium discoideum GN rbrA PE 3 SV 1
blastp_uniprot_sprot sp|Q949V6|ARI1_ARATH 7 166 + 160 Gaps:15 27.97 597 29.94 2e-19 Probable E3 ubiquitin-protein ligase ARI1 OS Arabidopsis thaliana GN ARI1 PE 2 SV 1
rpsblast_kog gnl|CDD|37026 6 167 + 162 Gaps:7 35.36 444 43.95 3e-36 KOG1815 KOG1815 KOG1815 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37025 68 163 + 96 Gaps:2 21.57 445 30.21 3e-07 KOG1814 KOG1814 KOG1814 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 82 126 45 PS50089 none Zinc finger RING-type profile. IPR001841
SUPERFAMILY 78 163 86 SSF57850 none none none
Gene3D 77 141 65 G3DSA:3.30.40.10 none none IPR013083
PANTHER 2 167 166 PTHR11685:SF10 none none none
PANTHER 2 167 166 PTHR11685 "UniPathway:UPA00143";signature_desc=RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING) none IPR031127

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting