Protein : Qrob_P0000290.2 Q. robur
Protein Identifier  ? Qrob_P0000290.2 Organism . Name  Quercus robur
Score  98.7 Score Type  egn
Protein Description  (M=12) PF14547 - Hydrophobic seed protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 68  
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0 Synonyms

0 GO Terms

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0016s01720g 10 66 + 57 none 13.01 438 92.98 6e-28 POPTRDRAFT_254832 hypothetical protein
blastp_kegg lcl|mdm:103426045 10 66 + 57 none 73.08 78 82.46 2e-26 36.4 kDa proline-rich protein-like
blastp_kegg lcl|mdm:103443282 10 66 + 57 none 22.62 252 85.96 4e-26 36.4 kDa proline-rich protein-like
blastp_kegg lcl|ath:AT3G22142 10 66 + 57 none 3.85 1480 78.95 6e-26 protease inhibitor/seed storage/LTP family protein
blastp_kegg lcl|pop:POPTR_0006s01020g 10 66 + 57 none 30.98 184 82.46 9e-26 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0670360 10 66 + 57 none 19.06 299 87.72 1e-25 Repetitive proline-rich cell wall protein 2 precursor putative
blastp_kegg lcl|pxb:103955508 10 66 + 57 none 30.98 184 82.46 1e-25 36.4 kDa proline-rich protein
blastp_kegg lcl|mdm:103432157 10 66 + 57 none 30.32 188 82.46 2e-25 36.4 kDa proline-rich protein-like
blastp_kegg lcl|mdm:103417216 10 66 + 57 none 26.76 213 80.70 1e-24 36.4 kDa proline-rich protein-like
blastp_kegg lcl|mdm:103405124 10 66 + 57 none 26.76 213 80.70 1e-24 36.4 kDa proline-rich protein
blastp_uniprot_sprot sp|Q00451|PRF1_SOLLC 10 67 + 58 Gaps:1 17.05 346 71.19 2e-21 36.4 kDa proline-rich protein OS Solanum lycopersicum GN TPRP-F1 PE 2 SV 1
blastp_uniprot_sprot sp|Q01595|CCDP_MAIZE 13 66 + 54 Gaps:1 42.64 129 52.73 1e-12 Cortical cell-delineating protein OS Zea mays PE 2 SV 1
blastp_uniprot_sprot sp|P14009|14KD_DAUCA 15 66 + 52 Gaps:1 38.69 137 58.49 1e-12 14 kDa proline-rich protein DC2.15 OS Daucus carota PE 2 SV 1
blastp_uniprot_sprot sp|Q8RW93|LBP65_ARATH 13 66 + 54 Gaps:2 43.75 128 50.00 5e-10 Putative lipid-binding protein At4g00165 OS Arabidopsis thaliana GN At4g00165 PE 2 SV 1
rpsblast_cdd gnl|CDD|72937 15 66 + 52 Gaps:1 62.35 85 62.26 1e-10 cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily composed of proteins with similarity to HPS a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon maize ZRP3 protein and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset of cortical cells..

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 8 66 59 SSF47699 none none IPR016140
PANTHER 13 67 55 PTHR31731 none none none
Pfam 7 67 61 PF14547 none Hydrophobic seed protein IPR027923
Gene3D 10 66 57 G3DSA:1.10.110.10 none none none

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting